Pseudomonas serboccidentalis: NN484_06180
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Entry
NN484_06180 CDS
T10180
Symbol
tssK
Name
(GenBank) type VI secretion system baseplate subunit TssK
KO
K11893
type VI secretion system protein ImpJ
Organism
plis Pseudomonas serboccidentalis
Pathway
plis02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
plis00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
NN484_06180 (tssK)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
plis02044
]
NN484_06180 (tssK)
Secretion system [BR:
plis02044
]
Type VI secretion system
Imp/Vas secretion system core components
NN484_06180 (tssK)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
WDR37316
UniProt:
A0ABY7ZCJ4
LinkDB
All DBs
Position
complement(1338944..1340275)
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AA seq
443 aa
AA seq
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MNTHKVIWQEGMLLRPQHFQHNDRYYDHQMKTRTQLLGGYTWGFLNLEIDLQFLNMGKLV
ISAASGILPDGSLFELGGNTEPLALDVPPNTGNTPIYLALPLVTGNHIEARRPEQSDVLA
RYTAYDAEVADSNAGDDSASQVSCGRPDFKLLLGEQQSDQAYVKLKICDVLDTTPDGVIS
LDPDFVPTYIQAHASSYLLSCLKEVISMLNHRGDTIAERIRSNGKVGGAEVGDFMMLQLI
NRTELLLRHYLGLEQVHPEELYRTLLTMLGDLATFSSDSKRPRLDSRYSHADQGASFRKL
MEAIRQVLSMVLEQHAIELILQARQYGIIVSPLHDHKLLGSASFVLAASANCDSEELRHR
LPAHLKVGPVERIRQLVNLHLPGIKVKPLPVAPRQIAFHSNKTYFILELSSEDLAQLERS
GGFAFHVSGEFAELELKFWAIRN
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgaatacccacaaagtcatttggcaggaaggcatgttgctgcgtccgcagcacttccag
cacaacgatcgctattacgatcaccagatgaaaacccgcacccaattgttgggtggctac
acctggggtttcctcaatctggagatcgacctgcagttcctcaacatgggcaaactggtg
atcagtgccgcctcggggatcctgccggacggcagcctgttcgaactcggcggcaacacc
gagccgctggcgctggacgtaccgccgaacaccggcaacacgccgatttacctggcgctg
ccgttggtcaccggtaaccacatcgaggcgcgccgtccggagcagtccgacgtgctggcg
cgttacaccgcgtacgacgccgaagtggccgactccaacgccggcgacgattccgccagc
caggtcagctgtggccgcccggacttcaaactgttgctcggcgagcagcagagcgatcag
gcctacgtgaagctgaagatctgcgacgtgctcgacaccacgcccgacggcgtgatcagc
ctcgatccggatttcgtgccgacctacatccaggcccacgcgtccagctatctgctgtcg
tgcctcaaagaagtcatcagcatgctcaaccaccggggcgacacgattgccgagcggatt
cgctccaacggcaaggtcggcggcgcggaagtcggcgacttcatgatgctgcaactgatc
aaccgcaccgaactgctgctgcgccactacctcggtctggagcaggtgcacccggaagag
ttgtaccgcacgctgctgaccatgctcggcgatctggcgaccttctccagcgacagcaag
cgcccgcgcctggacagccgttattcccacgccgatcagggcgcgagcttccgcaaactg
atggaagcgattcgtcaggtactgtcgatggtgctcgaacagcacgccatcgaactgatc
ctgcaagcgcgtcagtacggcatcatcgtgtcgccgttgcacgaccacaaactgctcggt
tcggcttcgttcgtgctggcggcgagtgccaactgcgactccgaagaactgcgccaccgc
ttgccggcgcacctcaaggtcggcccggtggagcgcatccgccaactggtcaacctgcac
ctgccggggatcaaggtcaaaccgttgcccgtggccccgcggcagatcgcgttccactcg
aacaaaacctacttcatcctcgaactcagttccgaagacctggcgcaactcgagcgctcc
ggcggcttcgcgttccacgtgtccggcgaatttgccgagcttgaactgaaattctgggcc
atcaggaactga
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