KEGG   Pseudomonas serboccidentalis: NN484_06215
Entry
NN484_06215       CDS       T10180                                 
Symbol
tssF
Name
(GenBank) type VI secretion system baseplate subunit TssF
  KO
K11896  type VI secretion system protein ImpG
Organism
plis  Pseudomonas serboccidentalis
Brite
KEGG Orthology (KO) [BR:plis00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:plis02044]
    NN484_06215 (tssF)
Secretion system [BR:plis02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   NN484_06215 (tssF)
SSDB
Motif
Pfam: T6SS_TssF
Other DBs
NCBI-ProteinID: WDR37323
LinkDB
Position
complement(1347518..1349305)
AA seq 595 aa
MSFNHYYQSELTALRQLGRRFAERSPALAPFLGQAGRDPDVERLLEGFAFLTGRLRQKLD
DELPELSHSLMQLLWPNYMRPLPAFSILQFDPLKRSGPALVVERDTPIESKPIEDVRCRF
RTCYPTEVLPLDLAALNYSVKGDGSLLSLRLEMSADGHLGELELSKLRLHFAGERYISQM
LYLSLLRNLEGIELIPLDGAGKPIDGVSGKPMAFKIPGDRVKPVGFAEEEALIPYPLNTF
RGYRYLQEYFAFQDKFLFVDVNGLDILKALPEDTLKQMRGLELRFDIRKSGIMRMRPTLD
NVKLFCTPIANLFAHDALPIRLDGKQDEYLLLPAEYDLENCGVFSVETVTGWKPGGLGYQ
EYVPFESFEHDPSFDVPNSRPHYSIRQRSSLLHDGLDTYLSFGIRHTEAHETLSIELMCT
NQNLPRKLKLGDICMACEETPEFLSFRNITPATSSFAPPLNRDFLWKLISNMSLNYLSLA
DVNALKVILETYDLPRYYDQHAEKVSKRLLGGLKHIKHHHVDRLHRGLPVRGLRTELTID
PEGYIGEGDLFVFASVLNEFFALYASLNSYHELRVKSTQGEVYQWTPRMGLQPLL
NT seq 1788 nt   +upstreamnt  +downstreamnt
gtgtcctttaaccactactaccaaagcgaactcaccgcactgcgccagctcggtcgccgt
ttcgccgagcgtagtcctgcgttggcgccgttcctggggcaggccgggcgggatccggat
gtggagcggttgctggaaggttttgctttcctcaccgggcgcctgcggcagaaactcgat
gacgagctgccggagctcagccattcgctgatgcaactgctgtggccgaactacatgcgt
ccgctgccggcgttcagcattctgcagttcgatccgctgaagcgttcgggcccggcgctg
gtggtcgagcgtgacacgccgattgaaagcaagccgatcgaagacgtgcggtgccgcttc
cgcacctgctatccaaccgaagtcttgccgctggatctggccgcgctgaattactcggtg
aaaggtgacggctcgctgctcagcctgcgtctggagatgagcgccgatggccacctcggt
gagctggagctgagcaagttgcgcctgcactttgccggcgagcgctacatcagccagatg
ctctacctgagcctgttgcgcaaccttgaaggcatcgaactgatcccgctcgacggtgct
ggcaaacccatcgatggcgtcagcggcaagccgatggcgttcaagattccgggtgaccgg
gtcaagccggtgggttttgccgaagaagaagcgctgatcccgtatccgctgaacaccttc
cgtggctatcgctacctgcaggaatattttgccttccaggacaagttcctgttcgtcgac
gtcaatggtctggacatcctcaaggcgctgccggaagacacgctcaagcagatgcgcggc
ctggagttgcgtttcgacattcgcaagagcggcatcatgcgcatgcgtccgaccctggat
aacgtgaagctgttctgcacgccgattgccaacctgttcgcgcacgacgcactgccgatc
cgcctcgacggcaagcaggacgagtacctgttgctgccggcggaatacgatctggaaaac
tgcggcgtgttctcggtggaaaccgtgaccggctggaagcccggcggcctcggttatcag
gaatacgtgccgttcgaatccttcgaacacgacccgagtttcgacgtgcccaacagccgt
ccgcactacagcatccgccagcgctcgtcgttgctgcacgacggtctcgacacctacctg
agcttcggcatccgccacaccgaagcccacgaaaccctgtcgatcgagctgatgtgcacc
aaccagaacctgccgcgcaagctcaagctcggcgacatctgcatggcctgcgaagagacc
ccggagttcctcagtttccgcaacatcaccccggccacgtcgagttttgcaccgccgctg
aaccgtgacttcctgtggaagctgatcagcaacatgtcgctcaactatctgtcgctggcc
gacgtcaacgcgttgaaggtgattctcgaaacctacgacctgccgcgctactacgaccag
cacgcggagaaggtcagcaaacgcctgctcggcggcctcaagcacatcaagcatcaccac
gtcgaccggctgcaccgtggcttgccggtgcgtggtctgcgcaccgaactgaccatcgac
ccggaagggtatatcggcgaaggcgacctgttcgttttcgcttcggttcttaacgagttt
ttcgcgctttacgccagtctcaattcgtaccacgagctgcgagtaaaaagcacacaggga
gaggtgtaccaatggacaccacgtatgggccttcagcccctgctttaa

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