Pseudomonas serboccidentalis: NN484_06245
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Entry
NN484_06245 CDS
T10180
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
KO
K11900
type VI secretion system protein ImpC
Organism
plis Pseudomonas serboccidentalis
Pathway
plis02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
plis00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
NN484_06245 (tssC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
plis02044
]
NN484_06245 (tssC)
Secretion system [BR:
plis02044
]
Type VI secretion system
Imp/Vas secretion system core components
NN484_06245 (tssC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
VMAP-M0
Motif
Other DBs
NCBI-ProteinID:
WDR37329
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All DBs
Position
complement(1352408..1353883)
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AA seq
491 aa
AA seq
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MSTSAAQEKSAASGEYSILDSIIAETRLTPDDEAYDIAKRGVSAFIEELLKPQNNGEPVK
KAMVDRMIAEIDAKLSRQMDEILHHPDFQALESSWRGLQLLVDRTNFRENIKIEILNVSK
EDLLDDFEDSPEVMQSGLYKHIYTAEYGQFGGQPVGAIIANYYMSPSSPDVKLMQYVASV
SCMSHAPFIAAAGPKFFGLESFTGLPDLKDLKDHFEGPQFAKWQSFRTSEDSRYVGLTVP
RFLLRNPYDPEENPVKSFVYKETVANSHEHYLWGNTAFAFGTKLTDSFAKFRWCPNIIGP
QSGGAVEDLPLHHFESMGEIETKIPTEVLVSDRREYELAEEGFISLTMRKGSDNAAFFSA
SSVQKPKFFGISAEGKAAELNYKLGTQLPYMMIVNRLAHYLKVLQREQLGSWKERTDLEL
ELNKWIRQYVADQENPSAEVRGRRPLRAAQVIVSDVEGEPGWYRVSLNVRPHFKYMGADF
TLSLVGKLDKE
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgagcactagcgcagcacaagagaagagcgccgccagcggcgaatacagcattctcgac
agcatcatcgccgaaacccgtctgactccggacgacgaagcctacgacatcgccaaacgc
ggtgtgtcggcgttcatcgaagaactgctcaagccgcagaacaacggtgagccggtcaag
aaggccatggttgaccgcatgatcgccgagatcgatgccaagctcagccgtcagatggac
gaaatcctgcaccacccggacttccaggccctggaatcctcgtggcgtggtctgcagttg
ctggtcgaccgcaccaacttccgcgaaaacatcaagatcgaaatcctcaacgtctccaaa
gaagacctgctggacgatttcgaagattcgccggaagtcatgcagtcgggcctgtacaag
cacatctacaccgctgaatacggccagttcggtggtcagccggttggcgcgatcatcgcc
aactactacatgtccccaagctccccggacgtgaagctgatgcagtacgtggccagcgta
tcctgcatgtcccacgcgccgttcatcgcggcggccggcccgaaattcttcggtctggaa
agcttcaccggcctgccggatctgaaagatctgaaagaccacttcgaaggcccgcaattc
gccaaatggcagagcttccgtacgtcggaagactcccgctacgttggcctgaccgtgccg
cgtttcctgctgcgtaacccgtacgatccggaagaaaacccggtcaagtcgttcgtgtac
aaggaaaccgttgccaacagccacgagcactacctgtggggcaacaccgcgttcgcgttc
ggcaccaagctgaccgacagcttcgccaaattccgctggtgcccgaacatcatcggccca
cagagcggtggcgcggttgaagacctgccgctgcaccacttcgaaagcatgggcgaaatc
gaaaccaagatccctaccgaggttctggtctccgaccgtcgtgaatacgaactggccgag
gaaggcttcatctccctgaccatgcgcaaaggctccgacaacgcggcgttcttctccgca
agctcggtgcagaagccgaagttcttcggcatcagcgcagaaggcaaggcggcagagctg
aactacaagctcggtacccaactgccgtacatgatgatcgtcaaccgcctggctcactac
ctgaaagtgctgcagcgcgagcaactcggttcgtggaaagagcgtaccgacctcgagctg
gaactgaacaagtggatccgccagtacgtggccgaccaggaaaacccgagcgccgaagtg
cgtggccgtcgtccgctgcgcgctgcgcaagtgatcgtcagcgacgttgaaggcgagccg
ggctggtaccgcgtcagcctgaacgtgcgcccgcacttcaagtacatgggtgccgatttc
accctgtcgctggttggcaagctggacaaagagtaa
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