Pseudomonas serboccidentalis: NN484_06515
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Entry
NN484_06515 CDS
T10180
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
plis Pseudomonas serboccidentalis
Pathway
plis03420
Nucleotide excision repair
plis03430
Mismatch repair
Brite
Enzymes [BR:
plis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NN484_06515 (uvrD)
DNA repair and recombination proteins [BR:
plis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NN484_06515 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
NN484_06515 (uvrD)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WDR37380
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Position
1423671..1425854
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AA seq
727 aa
AA seq
DB search
MRDDLSLLLNSLNDAQRQAVAAPVGRQLVLAGAGSGKTRVLVHRIAWLIQVENASPHSIL
SVTFTNKAAAEMRHRIEQLLGINPAGMWVGTFHGLAHRLLRAHWQEAGLSQTFQILDSDD
QQRLVKRVIRELGLDEQRWPARQAQWFINGQKDEGLRPQHIQASGDLYLATMRGIYEAYE
AACQRAGVIDFSELLLRALDLWRDHPGLLAHYQKRFRHILVDEFQDTNAVQYAWLRLLGK
GGDSLMVVGDDDQSIYGWRGAKIENIHQYSSDFPDSVTIRLEQNYRSTAGILKAANALIA
NNTGRLGKELWTDGGDGEAINLYAAFNEHDEARYVVETIESALKTGLARSDIAILYRSNA
QSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYLRLLEGRGNDAALERVINVPARGI
GEKTVEAIRDHARHSDVSMWEAMRQLVANKGLTGRAAGALGAFIELIENLAAKCMEMPLH
LMTQTVIEQSGLIAYHEAEKGEKGQARVENLEELVSAARNFENTEEDEELSPLAAFLGHA
SLEAGDTQADEHEDSIQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMQNLVMTYAETRRLYGSETYNKVSRFVREVPKGLIQEVRLSNSVSRPFGGNQ
SMSGSNLFSGSEIPETGFSLGQAVRHSIFGDGVILNFEGAGAQARVQVNFSEGSKWLMLG
YAKLEAI
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatgatctctcccttctgctgaactccctcaacgatgcccaacgccaggccgta
gcggcccccgttggccgtcagttggtcctggccggtgccggctccggtaaaacccgagtg
ctggtgcaccgtatcgcctggttgatccaggtcgaaaacgcctccccccactccattctg
tcggtgactttcaccaacaaggccgctgccgagatgcgtcaccgcatcgagcagttgctg
ggtatcaacccggccggcatgtgggtcggcaccttccacggcctggcgcaccgcctctta
cgggcgcactggcaggaagcgggcttgagccagaccttccagattctcgacagcgacgac
cagcaacgcctggtcaagcgggtgatccgcgagctggggctggacgaacagcgctggccg
gcccgtcaggcccagtggttcatcaacgggcagaaagacgaaggtctgcgtccacaacac
attcaggccagcggcgacttgtacctggccaccatgcgcggcatctatgaggcctacgag
gctgcgtgccagcgcgccggcgtcatcgatttctccgagctgctgctgcgcgccctcgac
ctgtggcgcgatcatccaggcctgttggcgcactaccagaagcgcttccggcacattctg
gtggacgagttccaggacaccaacgccgtgcagtatgcgtggttgcgtttgctgggcaag
ggcggcgacagcctgatggtggtcggcgacgacgaccagtcgatctacggctggcgcggc
gcgaaaatcgagaatattcatcagtactcgtccgacttcccggattcggtgaccattcgc
ctggagcagaactaccgctccaccgccggcatcctcaaggctgccaacgccctgatcgcc
aacaacaccggccgtctgggcaaagagctgtggaccgacggtggcgacggcgaagcgatc
aacctctatgccgcgttcaacgaacacgacgaagcacgctacgttgtcgaaactatcgaa
agcgcgctgaaaaccggccttgcccgcagcgatatcgcgattctctaccgctccaacgcc
caatcgcgcgttctggaagaagcgttgctgcgcgagcgcattccctaccgcatctatggc
ggccagcgcttcttcgagcgcgcggaaatcaagaacgccatggcctacctgcgccttctc
gaaggtcgcggcaacgatgcggcgctggagcgggtgatcaatgtgccggcccgtggcatt
ggcgaaaaaaccgtcgaagcgattcgtgaccatgcacgccacagcgatgtgtcgatgtgg
gaagcgatgcgccaactggtggccaacaaaggcctgaccggtcgtgccgccggtgcgctg
ggtgcgtttatcgagctgatcgaaaacctcgccgccaagtgcatggagatgccgctgcac
ctgatgacccagaccgtcatcgagcaatcggggctgatcgcctatcacgaagcggaaaaa
ggcgagaaaggccaggcccgggtagaaaaccttgaggaactggtcagcgccgcacgcaac
ttcgagaacaccgaagaagacgaagagctgtcgccactagcagcgttcctcggccacgct
tcgctggaagccggcgacactcaggccgacgaacacgaagacagcattcagttgatgacc
ctgcacagcgccaagggcctggaattcccatacgtgttcctggtgggcatggaagaaggc
ctgttcccgcacaagatgagcctggaagaaccggggcgtctggaagaggagcggcggctg
gcctacgtcggtatcactcgggccatgcagaatctggtgatgacctatgctgaaacccga
cgcctgtacggtagcgaaacctacaacaaggtctcgcgtttcgtccgtgaagtgccgaag
gggctgattcaggaagtacgcctgtcgaacagcgtcagccgaccgttcggcggcaaccag
tcgatgagtggcagcaacctgttcagcggcagcgagattccggaaaccggcttcagcctc
ggtcaggccgtgcgccattcgatcttcggcgacggcgtgatcctgaacttcgagggcgcc
ggcgcacaggcgcgggtgcaggtgaatttcagtgaaggcagcaagtggctgatgctgggg
tatgccaagctggaagcgatctga
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