Pseudomonas serboccidentalis: NN484_07005
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Entry
NN484_07005 CDS
T10180
Symbol
choX
Name
(GenBank) choline ABC transporter substrate-binding protein
KO
K02002
glycine betaine/proline transport system substrate-binding protein
Organism
plis Pseudomonas serboccidentalis
Pathway
plis02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
plis00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NN484_07005 (choX)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
plis02000
]
NN484_07005 (choX)
Transporters [BR:
plis02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
NN484_07005 (choX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OpuAC
Motif
Other DBs
NCBI-ProteinID:
WDR37474
LinkDB
All DBs
Position
complement(1528869..1529789)
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AA seq
306 aa
AA seq
DB search
MRKLSTALTIGLLALGSASAFAEQSCETVKMADPGWSDIAATNAIAGFLLDGMGYKAKVD
TLAVPITFGGLKDGQVDVFLGNWMPAQQGFYDKFVATGDVTQLAKNLDGTEFTLAVPDYV
WDAGVHNFADLNKYADKFDKKIYGIGSGAPANISLQEIIKKNDFDLGQWKLIESSEQAML
AEVSRAVKKQKFVTFLGWTPHPMNVQLKMHYLKGGEKYFGDTGSVFTLTRKGYAEACPNV
GKLLSNLSFTQEMENSIMAEVVNKKVSNADAVKAWIKANPAVLDKWLDGVKTADGKEALA
AVKAKL
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaagttatccacagcactgacgattggcctgctggccctgggcagcgcctcggca
ttcgccgagcaaagctgcgaaacggtgaaaatggccgatccgggctggagcgacatcgcc
gcaaccaacgccatcgccggttttttgctcgacggcatgggctacaaggccaaggtcgac
accctcgcggtgccgatcaccttcggcggcttgaaggacggtcaggtcgatgtgttcctc
ggtaactggatgccggcgcagcagggcttctacgacaaattcgtcgccaccggcgacgtg
acgcaactggcgaagaacctcgacggcaccgaattcaccctggcggtaccggactacgtg
tgggacgccggtgtgcacaactttgccgacctgaacaaatacgccgacaaattcgacaag
aagatctacggcatcggttccggcgcgcctgcgaacatctcgctgcaggagatcatcaag
aagaacgacttcgacctcggtcagtggaagctgatcgagtccagcgagcaggcgatgctc
gccgaagtttcgcgggcggtgaagaaacagaaattcgtcaccttcctcggctggaccccg
cacccgatgaacgtgcagttgaagatgcattacctgaagggcggcgagaagtatttcggc
gacaccggcagcgtgttcaccctgacgcgcaagggctacgccgaggcctgcccgaatgtg
ggcaagttgctgagcaacctgtcattcacccaggaaatggagaacagcatcatggctgag
gtggtgaacaagaaggtcagcaatgccgatgcggtgaaggcgtggatcaaggccaatccg
gcggtactggataaatggctggacggggtcaaaactgccgatggcaaagaagcgttggcg
gcggtgaaagccaagctctga
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