KEGG   Pseudomonas serboccidentalis: NN484_09145
Entry
NN484_09145       CDS       T10180                                 
Name
(GenBank) AAA family ATPase
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
plis  Pseudomonas serboccidentalis
Brite
KEGG Orthology (KO) [BR:plis00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:plis03400]
    NN484_09145
DNA repair and recombination proteins [BR:plis03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     NN484_09145
    Archaeal homologous recombinant proteins
     NN484_09145
SSDB
Motif
Pfam: AAA_23 SbcC_Walker_B AAA_29 AAA_21 SMC_N AAA_15 ABC_tran MMR_HSR1 RsgA_GTPase cobW AAA_22 nSTAND3
Other DBs
NCBI-ProteinID: WDR37885
LinkDB
Position
complement(1955226..1958867)
AA seq 1213 aa
MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAVPR
LNNTGRDAKVPDADGEIATGDPRTLLRRGTGEGYAEVDFVGVDGRRYRARWEANRAREKA
GGKLQASRQSLRDIDQDQLLASQKGEYKTQLETALGLNFEQFTRAVLLAQSEFSAFLKAD
DNDRSELLEKLTDTALYTRLGRRAFDKTKEAREAHKLLQDQATGVTPLAPEARAELDERF
NTAQQQLKLQQAQLKQLEQQHSWLKDLRQLQDAQQAAAEQLHSAQQQWEGLAGERLKLTR
LEQLAPQRHQFARKSELDAQLTPLATQIAAHTRQYGELGERQTQLEQALESAKVALSEAQ
QRHSESAPLLRQAFEEQSTLARLAKDTALSAEARQSAEQACTQGQSAIQALQAKQAEVAE
RLQKMAAELEQSADLAPLSDAWNAYRDRLQQLMLIGNRLNKGQAELASLEQNAVQSAEAL
ATQKQQLEVLFKEAGAEPDAVAEQIGILGNLLQDNRKQLRAIEDMTRLWASQQELEKRGA
ELHQRLLDAQQERERLTQDGVKTKAELTVAEQTLNVTRELLERQRLARSASVEELRAQLQ
DDQPCPVCGSNEHPYHQPEALLQSLGRHDESEQAAAQQAVDQLKEKLTELRADVGGVIAR
QKELLQQQEQLTAQLQALAPSLQAHPLATALFNQDADKRDAWLTRQTDQLNQSITQDEQR
QSALLTLQQDAARLTQQLRNAETAHQQAAQHLSNQQRELSSDRQRLDEELSAFASLLPAD
TLEALRVEPAATFMQLDRQIAERLALVDQHKEELAEQQQRQQTLEKEQDRQLSRVQQLQS
AEQQFSALAEQQQACQAKLAQLLGEHSSAEHWQQQLEQAVEQARNAETSTAQELQNVRTQ
LVQIVTELKAQQERQQSLESEDRELTGKIADWRARHPELDDGGLEDLLRVDDAQVSELRQ
RLQHNEKSVEQAKVLLQERDQRLADHQAQHNGNLDAEQLASALADLQNQFNLSEQQCAEL
RAEQAEDQRRQHANQALAQQIADAYAEYQRWARLNALIGSATGDTFRKIAQAYNLDLLVH
HANVQLRQLVKRYRLKRGGSMLGLLVMDTEMGDELRSVHSLSGGETFLVSLALALGLASM
ASSTLKIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIQV
QRQGNGLSTLEVK
NT seq 3642 nt   +upstreamnt  +downstreamnt
atgaagattctcgccattcgcttgaagaacctcgcctcgctggccggcccgttcgagatc
gatttcaccgccgaaccgctggccagcgccggcctgttcgcgatcaccgggccgaccggg
gccggcaaaagtaccctgctcgatgccctgtgcctggcgctgttcggcgccgtgccgcgc
ctgaacaacaccggccgcgacgccaaggttccggacgctgacggcgaaatcgccactggc
gacccgcgcaccttgctgcgccgcggtaccggcgaaggttatgccgaagtggattttgtc
ggcgtcgatggccgtcgttatcgcgcacgctgggaagccaaccgcgcccgggaaaaggcc
ggcggcaagttgcaggccagccgccagagcctgcgcgacatcgatcaggatcaactgctc
gccagtcagaaaggcgaatacaaaacccaactcgaaaccgcactgggcctgaacttcgaa
cagttcacccgcgccgtgctgctggcccagagcgagttcagcgcgttcctcaaggccgac
gacaacgaccgtagcgaactgctggaaaaacttaccgacacggcgctctacacccgtctc
ggccgccgcgcgttcgacaagaccaaggaggcccgcgaagcgcacaagctgctgcaggat
caggccaccggcgtcaccccgctggcgcccgaggcgcgggccgaactggacgaacgcttc
aacaccgctcagcaacagctgaaattgcagcaggcgcagctcaagcaactggaacaacag
cacagctggctcaaggatttgcgccagttgcaggacgcgcaacaagccgctgccgagcaa
ctgcacagtgcgcaacagcagtgggaaggtctggccggcgaacgcctgaagctgacgcgc
ctggaacaactcgccccgcaacgtcaccagttcgcacgcaagtccgaactcgatgcgcaa
ctgaccccgttggctacacagattgccgcgcacacccgccaatacggcgaactcggcgag
cgccagacgcaactggaacaggccctcgagtcggcgaaagtcgccctgagtgaagcgcag
cagcgacacagcgaaagcgccccgctgctgcgtcaggcattcgaggagcaaagcaccctc
gcccgcctcgccaaggacaccgccctcagcgccgaggctcgccagtccgccgaacaggcc
tgcacgcaaggccagagcgccattcaggcgttgcaggcgaaacaggccgaggtcgctgaa
cgtctgcagaaaatggcggccgagctggaacagagtgccgatctggcgccgctgagcgat
gcgtggaatgcctaccgcgatcgcctgcaacagctgatgctgatcggcaatcgcctgaac
aagggccaggccgaactcgccagcctcgaacagaacgcggtgcaaagcgccgaggcgctg
gccacgcaaaaacaacaactggaagtgctgttcaaagaagccggcgccgagccggatgcg
gtcgccgagcagatcggtatcctcggcaacctgttgcaggacaaccgtaaacagctgcgc
gccattgaagacatgacccggctctgggccagtcagcaagagctggaaaaacgcggcgcc
gagctgcaccagcgcctgctcgacgcgcaacaggaacgcgagcgcctgacccaggacggg
gtgaaaaccaaagccgaactgacggtcgccgaacaaaccctcaacgtcacccgtgaattg
cttgaacgccagcgtctggcccgtagcgccagtgtcgaagagctgcgcgcgcagttgcag
gatgatcagccgtgcccggtctgcggcagcaatgagcatccgtatcaccagcctgaagcg
ttgctgcaaagcctgggtcgccacgatgaaagtgagcaggccgcggcgcagcaagcggtg
gatcagctcaaggaaaaactcaccgagctgcgcgccgatgtcggtggcgtgatcgctcgg
cagaaagagctgctgcaacagcaagaacaattgaccgcccagctccaggcattggcgccg
agtctgcaggcgcatccgctggcaacggccttgttcaatcaggacgccgacaagcgcgac
gcctggctgacccgacaaaccgatcagttgaaccagagcatcactcaggacgaacaacgc
cagagcgccctgctcaccctgcaacaggatgccgcacgcctgacccagcaactgcgcaat
gccgagaccgcgcatcagcaagcggcgcagcacctgagcaatcaacaacgcgaattgagc
agcgaccgtcagcgcctcgacgaagaactcagcgcgttcgccagcctgctgccggccgac
accctcgaagccttgcgcgtcgagccggcggcgaccttcatgcagctcgaccggcagatt
gccgagcgcctggcgctagtcgatcagcacaaggaagaattggccgaacagcagcaacgc
cagcagacgctggagaaggaacaggatcgccagctcagccgcgtgcagcagctgcaaagc
gccgagcagcagttcagcgcactggccgagcagcaacaggcctgccaggcgaaactcgcg
caactgctgggcgaacacagcagcgccgagcactggcagcagcaactggaacaggccgtg
gagcaggcgcgcaatgccgaaacaagcaccgcgcaagaactgcagaacgtgcgcacgcaa
ctggtgcagatcgttacggagttgaaagcgcaacaggagcgacagcagtccctggaaagc
gaagaccgcgagctgacgggcaaaatcgccgactggcgcgcgcgtcatcccgagctggat
gacggcggtctcgaagacctgctgcgcgtcgacgacgcgcaggtcagcgaactgcgtcag
cgcttgcagcacaacgaaaaatccgtcgaacaggccaaggtgctgctgcaggaacgtgac
cagcgtctggctgatcatcaggcgcagcacaacggcaacctcgatgccgaacaactcgcc
agtgccctcgccgacctgcaaaaccagttcaacctcagcgagcaacaatgcgccgaattg
cgcgccgaacaggctgaagaccagcgtcggcagcacgccaatcaggcgctggcgcagcag
atcgccgacgcctatgccgagtatcagcgctgggcgcggttgaatgcgttgatcggttcg
gccaccggcgacacgttccgcaagatcgctcaggcctacaacctcgacctgctggtgcat
cacgccaacgtgcagttgcgccagctggtcaaacgctatcgcctgaaacgcggcggcagc
atgctcggcctgctggtgatggacaccgagatgggcgacgaactgcgctcggtgcattcg
ctgtccggcggcgagacgttcctggtgtcgctggccctggcactgggcctggcatcgatg
gcgtcgagcacgctgaagatcgaatcgctgttcatcgacgaaggcttcggcagcctcgac
ccggaatccctgcaactggccatggacgctctcgacggcttgcaggcacaggggcgcaag
gttgcggtgatatcccacgtacaggaaatgcacgaacggattccggtacagattcaggtg
cagcgtcaaggtaatggcctgagcaccctggaggtgaaatga

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