Pseudomonas serboccidentalis: NN484_09145
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Entry
NN484_09145 CDS
T10180
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
plis Pseudomonas serboccidentalis
Brite
KEGG Orthology (KO) [BR:
plis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plis03400
]
NN484_09145
DNA repair and recombination proteins [BR:
plis03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NN484_09145
Archaeal homologous recombinant proteins
NN484_09145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
AAA_21
SMC_N
AAA_15
ABC_tran
MMR_HSR1
RsgA_GTPase
cobW
AAA_22
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
WDR37885
LinkDB
All DBs
Position
complement(1955226..1958867)
Genome browser
AA seq
1213 aa
AA seq
DB search
MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAVPR
LNNTGRDAKVPDADGEIATGDPRTLLRRGTGEGYAEVDFVGVDGRRYRARWEANRAREKA
GGKLQASRQSLRDIDQDQLLASQKGEYKTQLETALGLNFEQFTRAVLLAQSEFSAFLKAD
DNDRSELLEKLTDTALYTRLGRRAFDKTKEAREAHKLLQDQATGVTPLAPEARAELDERF
NTAQQQLKLQQAQLKQLEQQHSWLKDLRQLQDAQQAAAEQLHSAQQQWEGLAGERLKLTR
LEQLAPQRHQFARKSELDAQLTPLATQIAAHTRQYGELGERQTQLEQALESAKVALSEAQ
QRHSESAPLLRQAFEEQSTLARLAKDTALSAEARQSAEQACTQGQSAIQALQAKQAEVAE
RLQKMAAELEQSADLAPLSDAWNAYRDRLQQLMLIGNRLNKGQAELASLEQNAVQSAEAL
ATQKQQLEVLFKEAGAEPDAVAEQIGILGNLLQDNRKQLRAIEDMTRLWASQQELEKRGA
ELHQRLLDAQQERERLTQDGVKTKAELTVAEQTLNVTRELLERQRLARSASVEELRAQLQ
DDQPCPVCGSNEHPYHQPEALLQSLGRHDESEQAAAQQAVDQLKEKLTELRADVGGVIAR
QKELLQQQEQLTAQLQALAPSLQAHPLATALFNQDADKRDAWLTRQTDQLNQSITQDEQR
QSALLTLQQDAARLTQQLRNAETAHQQAAQHLSNQQRELSSDRQRLDEELSAFASLLPAD
TLEALRVEPAATFMQLDRQIAERLALVDQHKEELAEQQQRQQTLEKEQDRQLSRVQQLQS
AEQQFSALAEQQQACQAKLAQLLGEHSSAEHWQQQLEQAVEQARNAETSTAQELQNVRTQ
LVQIVTELKAQQERQQSLESEDRELTGKIADWRARHPELDDGGLEDLLRVDDAQVSELRQ
RLQHNEKSVEQAKVLLQERDQRLADHQAQHNGNLDAEQLASALADLQNQFNLSEQQCAEL
RAEQAEDQRRQHANQALAQQIADAYAEYQRWARLNALIGSATGDTFRKIAQAYNLDLLVH
HANVQLRQLVKRYRLKRGGSMLGLLVMDTEMGDELRSVHSLSGGETFLVSLALALGLASM
ASSTLKIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIQV
QRQGNGLSTLEVK
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgaagattctcgccattcgcttgaagaacctcgcctcgctggccggcccgttcgagatc
gatttcaccgccgaaccgctggccagcgccggcctgttcgcgatcaccgggccgaccggg
gccggcaaaagtaccctgctcgatgccctgtgcctggcgctgttcggcgccgtgccgcgc
ctgaacaacaccggccgcgacgccaaggttccggacgctgacggcgaaatcgccactggc
gacccgcgcaccttgctgcgccgcggtaccggcgaaggttatgccgaagtggattttgtc
ggcgtcgatggccgtcgttatcgcgcacgctgggaagccaaccgcgcccgggaaaaggcc
ggcggcaagttgcaggccagccgccagagcctgcgcgacatcgatcaggatcaactgctc
gccagtcagaaaggcgaatacaaaacccaactcgaaaccgcactgggcctgaacttcgaa
cagttcacccgcgccgtgctgctggcccagagcgagttcagcgcgttcctcaaggccgac
gacaacgaccgtagcgaactgctggaaaaacttaccgacacggcgctctacacccgtctc
ggccgccgcgcgttcgacaagaccaaggaggcccgcgaagcgcacaagctgctgcaggat
caggccaccggcgtcaccccgctggcgcccgaggcgcgggccgaactggacgaacgcttc
aacaccgctcagcaacagctgaaattgcagcaggcgcagctcaagcaactggaacaacag
cacagctggctcaaggatttgcgccagttgcaggacgcgcaacaagccgctgccgagcaa
ctgcacagtgcgcaacagcagtgggaaggtctggccggcgaacgcctgaagctgacgcgc
ctggaacaactcgccccgcaacgtcaccagttcgcacgcaagtccgaactcgatgcgcaa
ctgaccccgttggctacacagattgccgcgcacacccgccaatacggcgaactcggcgag
cgccagacgcaactggaacaggccctcgagtcggcgaaagtcgccctgagtgaagcgcag
cagcgacacagcgaaagcgccccgctgctgcgtcaggcattcgaggagcaaagcaccctc
gcccgcctcgccaaggacaccgccctcagcgccgaggctcgccagtccgccgaacaggcc
tgcacgcaaggccagagcgccattcaggcgttgcaggcgaaacaggccgaggtcgctgaa
cgtctgcagaaaatggcggccgagctggaacagagtgccgatctggcgccgctgagcgat
gcgtggaatgcctaccgcgatcgcctgcaacagctgatgctgatcggcaatcgcctgaac
aagggccaggccgaactcgccagcctcgaacagaacgcggtgcaaagcgccgaggcgctg
gccacgcaaaaacaacaactggaagtgctgttcaaagaagccggcgccgagccggatgcg
gtcgccgagcagatcggtatcctcggcaacctgttgcaggacaaccgtaaacagctgcgc
gccattgaagacatgacccggctctgggccagtcagcaagagctggaaaaacgcggcgcc
gagctgcaccagcgcctgctcgacgcgcaacaggaacgcgagcgcctgacccaggacggg
gtgaaaaccaaagccgaactgacggtcgccgaacaaaccctcaacgtcacccgtgaattg
cttgaacgccagcgtctggcccgtagcgccagtgtcgaagagctgcgcgcgcagttgcag
gatgatcagccgtgcccggtctgcggcagcaatgagcatccgtatcaccagcctgaagcg
ttgctgcaaagcctgggtcgccacgatgaaagtgagcaggccgcggcgcagcaagcggtg
gatcagctcaaggaaaaactcaccgagctgcgcgccgatgtcggtggcgtgatcgctcgg
cagaaagagctgctgcaacagcaagaacaattgaccgcccagctccaggcattggcgccg
agtctgcaggcgcatccgctggcaacggccttgttcaatcaggacgccgacaagcgcgac
gcctggctgacccgacaaaccgatcagttgaaccagagcatcactcaggacgaacaacgc
cagagcgccctgctcaccctgcaacaggatgccgcacgcctgacccagcaactgcgcaat
gccgagaccgcgcatcagcaagcggcgcagcacctgagcaatcaacaacgcgaattgagc
agcgaccgtcagcgcctcgacgaagaactcagcgcgttcgccagcctgctgccggccgac
accctcgaagccttgcgcgtcgagccggcggcgaccttcatgcagctcgaccggcagatt
gccgagcgcctggcgctagtcgatcagcacaaggaagaattggccgaacagcagcaacgc
cagcagacgctggagaaggaacaggatcgccagctcagccgcgtgcagcagctgcaaagc
gccgagcagcagttcagcgcactggccgagcagcaacaggcctgccaggcgaaactcgcg
caactgctgggcgaacacagcagcgccgagcactggcagcagcaactggaacaggccgtg
gagcaggcgcgcaatgccgaaacaagcaccgcgcaagaactgcagaacgtgcgcacgcaa
ctggtgcagatcgttacggagttgaaagcgcaacaggagcgacagcagtccctggaaagc
gaagaccgcgagctgacgggcaaaatcgccgactggcgcgcgcgtcatcccgagctggat
gacggcggtctcgaagacctgctgcgcgtcgacgacgcgcaggtcagcgaactgcgtcag
cgcttgcagcacaacgaaaaatccgtcgaacaggccaaggtgctgctgcaggaacgtgac
cagcgtctggctgatcatcaggcgcagcacaacggcaacctcgatgccgaacaactcgcc
agtgccctcgccgacctgcaaaaccagttcaacctcagcgagcaacaatgcgccgaattg
cgcgccgaacaggctgaagaccagcgtcggcagcacgccaatcaggcgctggcgcagcag
atcgccgacgcctatgccgagtatcagcgctgggcgcggttgaatgcgttgatcggttcg
gccaccggcgacacgttccgcaagatcgctcaggcctacaacctcgacctgctggtgcat
cacgccaacgtgcagttgcgccagctggtcaaacgctatcgcctgaaacgcggcggcagc
atgctcggcctgctggtgatggacaccgagatgggcgacgaactgcgctcggtgcattcg
ctgtccggcggcgagacgttcctggtgtcgctggccctggcactgggcctggcatcgatg
gcgtcgagcacgctgaagatcgaatcgctgttcatcgacgaaggcttcggcagcctcgac
ccggaatccctgcaactggccatggacgctctcgacggcttgcaggcacaggggcgcaag
gttgcggtgatatcccacgtacaggaaatgcacgaacggattccggtacagattcaggtg
cagcgtcaaggtaatggcctgagcaccctggaggtgaaatga
DBGET
integrated database retrieval system