Pseudomonas serboccidentalis: NN484_12120
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Entry
NN484_12120 CDS
T10180
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
plis Pseudomonas serboccidentalis
Pathway
plis02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
plis00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NN484_12120
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
plis02022
]
NN484_12120
02035 Bacterial motility proteins [BR:
plis02035
]
NN484_12120
Two-component system [BR:
plis02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
NN484_12120
Bacterial motility proteins [BR:
plis02035
]
Pilus system
Twitching motility proteins
NN484_12120
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
AAA_16
HTH_50
HTH_30
Pre_tape_measure
Mg_chelatase
VpsR
AAA_22
AAA
FliH
Motif
Other DBs
NCBI-ProteinID:
WDR38445
UniProt:
A0ABY7ZFE8
LinkDB
All DBs
Position
2662527..2663873
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AA seq
448 aa
AA seq
DB search
MNTSPRQKILIVDDEPDIRELLEITLGRMKLDTFSARNLGEAQALLQRTAFDLCLTDMRL
PDGTGLELVQHIQQRYPQVPVAMITAYGSLETAINALKAGAFDFLTKPVDLTRLRELVNT
ALRMPATGGSVTSIDRRLLGDSPPMRALRKQIDKLARSQAPVYISGESGSGKELVARLIH
EQGPRAQQPFVPVNCGAIPSELMESEFFGHRKGSFTGAVDDKPGLFQAAQGGTLFLDEVA
DLPLSMQVKLLRAIQEKAVRSIGGQQETVVDVRILCATHKDLEAEVAAERFRQDLYYRLN
VIELRVPSLRERRDDIEALAAHMLQRLASGSGQPAARLHPQALEALKSYRFPGNVRELEN
VLERAHTLCENQVIEAEDLRLSEGNCTVEGGIADLTQIDNLEDYLENVERKLILQALEET
RWNRTAAAQRLSLSFRSMRYRLKKLGLD
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
ttgaacacgagcccacggcaaaaaatcctcatcgtcgacgacgagccggatatccgcgaa
ctcctggaaatcaccctgggacggatgaaactcgacaccttcagcgcgcgcaacctcggc
gaagcccaagcgctgttgcagcgcactgcgttcgacctgtgcctgaccgacatgcgcctg
ccggacggcacagggctggagctggtgcagcacatccagcaacgttatccacaagtgccg
gtggcgatgatcaccgcatacggcagcctggaaaccgcaatcaacgccctgaaggccggg
gccttcgactttctcaccaaaccggttgacctcacgcgcctgcgagaactggtcaacacc
gcgctgcgcatgcctgccaccggcggcagcgttacgtcgatcgaccgccgactgctgggc
gactcgccgccgatgcgcgccttgcgcaaacaaatcgacaagctagcccgcagtcaggca
ccggtttatatcagcggcgaatccggcagcggcaaagagctggtcgcgcgactgatccac
gaacaggggccgcgcgctcaacagccgtttgtgccagtcaactgcggagcgattccgtcg
gagctgatggagagcgagtttttcgggcatcgcaaaggcagcttcaccggcgcagtggac
gacaaaccaggcctgtttcaggccgcgcaaggtggcactctgtttctcgacgaagtggcg
gacctgccactgtcgatgcaagtaaaactgctgcgggcgattcaggaaaaagccgtgcgc
agcatcggcggccagcaggaaaccgtggtcgacgtgcgcattctttgcgccacgcacaag
gatctcgaagcagaagtcgccgccgaacgttttcgccaggacctgtattaccggttgaac
gtgatcgagctacgggtgccgtctctgcgcgaacgacgcgacgacatcgaagcactggcc
gcgcacatgctccagcgcctggccagcggcagcggccagccggctgcccgcctgcacccg
caggcgcttgaggcgctgaagagctaccgttttccggggaatgtacgggaactggagaat
gtcctcgaacgtgcgcacacgctgtgcgaaaaccaggtaatcgaggctgaggatttgcgc
ctgagcgaagggaattgcacggtcgagggcggtattgccgacctgacgcagatcgacaac
cttgaggattatctggagaacgtcgagcgcaaactgatcctgcaagcgctggaggaaacg
cgctggaatcgcacggcagcggcgcagcggttgagtctgtcgtttcggtcgatgcgctac
aggctgaagaaactcggcctggattga
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