Pseudomonas serboccidentalis: NN484_12305
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Entry
NN484_12305 CDS
T10180
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
plis Pseudomonas serboccidentalis
Pathway
plis00260
Glycine, serine and threonine metabolism
plis00460
Cyanoamino acid metabolism
plis00630
Glyoxylate and dicarboxylate metabolism
plis00670
One carbon pool by folate
plis00680
Methane metabolism
plis01100
Metabolic pathways
plis01110
Biosynthesis of secondary metabolites
plis01120
Microbial metabolism in diverse environments
plis01200
Carbon metabolism
plis01230
Biosynthesis of amino acids
plis01240
Biosynthesis of cofactors
plis04981
Folate transport and metabolism
Module
plis_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
plis00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NN484_12305
09102 Energy metabolism
00680 Methane metabolism
NN484_12305
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NN484_12305
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
NN484_12305
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
NN484_12305
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
NN484_12305
Enzymes [BR:
plis01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
NN484_12305
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
WDR38481
UniProt:
A0ABY7ZHA4
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All DBs
Position
2704325..2705578
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AA seq
417 aa
AA seq
DB search
MFSRDLTIAKYDADLFAAMEQEAQRQEEHIELIASENYTSPAVMEAQGSVLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQPHAGSQANAAVYLALLQGGDTILGMS
LAHGGHLTHGASVSSSGKLYNAVQYGIDANGLIDYDEVERLAVEHKPKMIVAGFSAYSQI
LDFPRFRAIADKVGAYLFVDMAHVAGLVAAGVYPNPVPFADVVTTTTHKTLRGPRGGLIL
ARANAEIEKKLNSAVFPGAQGGPLEHVIAAKAICFKEALQPEFKAYQEQVVKNAQAMAEV
FIARGFDVVSGGTKNHLFLLSLIKQDISGKDADAALGKAFITVNKNSVPNDPRSPFVTSG
LRFGTPAVTTRGFKEAECKELAGWICDILADLNNEAVIDAVREKVKAICKKLPVYGA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagccgtgatttgactattgccaagtacgacgccgacctttttgccgccatggag
caagaagctcagcgccaggaagaacacattgagctgatcgcttcggaaaactacaccagc
cctgcggtgatggaagctcaaggctcggtcctgaccaacaaatacgccgaaggttacccg
ggcaagcgctactacggtggttgcgagtacgtcgacgttgttgagcaactggccatcgac
cgcgccaaggaactgttcggcgccgattacgccaacgttcagccgcacgccggttcgcaa
gccaacgccgctgtctacctggccctgctgcaaggtggcgacaccattctgggcatgagc
ctggcccatggtggtcacctgacccacggcgccagcgtttcgtcctccggcaagctgtac
aacgccgtgcagtacggcatcgacgccaacggcctgatcgactacgacgaagtcgagcgt
ctggcggttgagcacaagccgaaaatgatcgtggccggtttctctgcctactcgcagatc
ctggacttcccgcgcttccgcgccatcgctgacaaagtcggtgcttacctgttcgtcgac
atggcgcacgtggccggtctggtcgctgctggcgtctacccgaacccggtgcctttcgct
gacgtggtcaccaccactacccacaagaccctgcgcggtccacgtggcggcctgatcctg
gcgcgcgccaacgccgagatcgagaagaagctgaactccgcagtattcccgggcgcccag
ggtggcccgctggagcacgtgatcgccgctaaagcgatctgcttcaaggaagcgctgcag
cctgaattcaaggcttaccaggaacaagtggtgaagaacgcccaggccatggccgaagtg
ttcatcgcgcgcggtttcgacgtggtgtccggtggtaccaagaaccacctgttcctgctg
tcgctgatcaagcaggacatttccggtaaagacgccgacgctgcgctgggcaaagcgttc
atcaccgtgaacaagaactcggtacccaacgatccacgctcgccattcgtcacctccggc
ctgcgcttcggcaccccggctgtgaccactcgtggcttcaaggaagcagagtgcaaagag
ctggccggctggatctgcgacatcctggctgacctgaacaacgaagcggtgatcgacgcc
gttcgtgagaaagtcaaagccatctgcaagaagctgccggtttacggcgcctaa
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