Pseudomonas serboccidentalis: NN484_13140 Help Entry NN484_13140       CDS       T10180                                  Name (GenBank) DEAD/DEAH box helicase   KO K03724   ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] Organism plis  Pseudomonas serboccidentalis Brite KEGG Orthology (KO) [BR:plis00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:plis03400]     NN484_13140 Enzymes [BR:plis01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      NN484_13140     5.6.2.6  RNA 3'-5' helicase      NN484_13140 DNA repair and recombination proteins [BR:plis03400]  Prokaryotic type   Other factors with a suspected DNA repair function    DNA helicases     NN484_13140 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD_assoc WHD_4th_Lhr DEAD WHD_Lhr WHD_3rd_Lhr Helicase_C ResIII Cas3-like_C_2 HTH_IclR WHD_DprA AAA_22 Motif Other DBs NCBI-ProteinID:  WDR38644 UniProt:  A0ABY7ZFZ5 LinkDB All DBs Position 2878670..2882971 Genome browser AA seq 1433 aa AA seqDB search MNLPIPKDAALAGFHPAVSAWFSSTFPTVTAAQARAWPLIRQRRSTLIAAPTGSGKTLTA FLAVLDDLVHRGLENPDGLPDETLVVYVSPLKALSNDIRINLQNPLAGITEQLRQMGQPE LQITTAVRTGDTPQKERVAMRKSAPHILVTTPESLYVLLGSESGRKMLGTTRTVIVDEIH AIAASKRGSHLALSLERLQALCAEPLTRIGLSATQKPIDAVARFLVGTDRPCEIIDIGHA RPRDLGIEVPPVPLSAVMANDVWELVYDRLAEFAREHRTTLIFVNTRRLAERLSRHLSER LGKHAVAAHHGSLAKEFRLDAEQRLKRGELQVLIATASLELGIDIGEVDLVCQIASPRSI AGFLQRVGRSGHQVGGTPKGRLFATTRDDLIECAALLDCVRRGELDTLHIPEAPLDVLAQ QIIAEVSCQEWAEDALLTTFRRASPYRELDEKHYQALLTMLAEGYNGRQGIRSAYLHRDA VSRTLRGRRGAQLTAVTSGGTIPDNADYSVLLEPQGLNIGSVNEDFAVESIAGDVFQLGN TSYRILRVETGKVRVEDALGQPPTIPFWLGEAPGRSDELSSAVARLQATLDELLSSRPGD LQPALDWLTATLGLNRASAEQLVEYLSRARLTLGALPSQDTLLMERFFDESGGTQLIIHS PFGSRINRAWGLALRKRFCRTFNFELQAAASEDAIVLSLSTSHSFELDDVWRYLHSNSAE HILIQAILDAPLFGVRWRWNAGVALALPRFTGGRKVAPQLQRMKSEDLIASVFPDQIACL ENLAGEREVPEHPLVEQTLDDCLHEAMDSEGWLQLLRRMERGEVRLLSRDLPAPSPLAAE ILSARPYTFLDDAPLEERRTQAVINRRWSDPQSTDDLGALDADAIDAVREEAWPTPANVD EMHEALMSLACVSEAEVQANQPWREWLNTLTDGGRACCLMIDPQRCLWLARERLTCLLAL YPQATLQPQQEALPGFNEPWTFDEALVEMIRARLGAFGPLPLPAIAEPLALPTAQVAQAL AQLEREGYVLRGHFTPGVAVEEWCERHLLARIHRYTVKRLRREIEPVALQDFMRFLFDWQ HLSNATRGQGSAVLPAIVGQFEGYPAAASAWDSDILPARLKDYSPSWLDDLCRNGKLVWT RLSARQKVSGTALRSTPIVLLPRSQVGLWSALAEQTPVSELSPKTRKVHEALSQHGALFF DELIHEAHLLRTELEIALQELVGAGLVNADSFAGLRALITPASKRQQRSSRRGRGAFVGG MDDAGRWALLRRGPLVENHQSVSPETLEHVAMTLLRRYGVVFWRLLEREADWLPSWRELL RTFHRLEARGEIRGGRFVSGLAGEQFALPEAIPLLREVRRRPHDGSLIAVCGVDPLNLAG TLLPGVKVPALASNRLVYRDGLPAAAEIAGKQQIWLELDQVSMEQVRGKLIRH NT seq 4302 nt NT seq  +upstreamnt  +downstreamnt atgaatctgcccatccccaaggacgccgccctggcaggcttccaccccgccgtcagcgcc tggttcagcagcaccttcccgacggtcaccgccgctcaggcccgcgcgtggccgttgatc cgccagcgccgctcgacgctgatcgccgcgcccaccggttccggcaaaacccttaccgcg ttcctcgccgtgctcgacgacctcgtccaccgtggcctggaaaaccccgacggcctgcca gacgagaccctggtggtctacgtttcgccgctcaaggcgttgtccaacgacatccgcatc aacctgcagaacccgctggcggggatcaccgagcagttgcgccagatgggccagcccgaa ttgcagatcaccacggccgtgcgcaccggcgacaccccgcaaaaagagcgcgtcgccatg cgcaaaagcgcgccgcacattctggtgaccaccccggaatcgctgtacgtgctgctcggc tccgagtccggacgcaaaatgctcggcaccacacgcacggtgatcgtcgacgaaatccat gcgatcgccgccagcaagcgcggcagccacctggcgctgagcctcgaacgcttgcaggcc ctgtgcgccgaaccgctgacccgcatcggtttgtccgccacgcaaaaacccatcgacgcc gtggcgcggtttctggtcggcaccgatcggccctgcgagatcatcgacatcggccacgcc cgcccgcgggacctgggcattgaagtgccgccggtgccgttgtcagcagtgatggccaac gacgtctgggaactggtctacgatcgcctcgccgagtttgcccgcgaacaccgcaccacg ctgattttcgtcaacacccggcgtctggccgaacgcttgagccgccacctcagcgaacgc ctgggcaaacacgcagtcgccgcgcaccacggcagtctggccaaggagtttcgcctcgac gccgaacagcggctcaagcgtggcgaactgcaagtgctgatcgccaccgcctcgctggaa ttgggcatcgatatcggcgaagtcgatctggtctgtcagatcgcctcgccgcgatcgatt gccgggtttctgcaaagagtggggcgttccggacaccaggtcggtggcacgcccaaaggt cgcttgttcgccaccacccgcgacgacctgatcgaatgcgccgccctgctcgactgcgtg cgccgtggcgaactcgacaccctgcacattcctgaagcgccgctggatgtactggcgcag cagatcatcgccgaagtcagttgccaggaatgggcggaagacgcgctgctgacgaccttc cgcagagcctcgccctatcgcgaactcgacgaaaaacactatcaggcgctgctgaccatg ctcgccgaaggctacaacggtcgccagggcatccgcagcgcttacctgcatcgcgacgcc gtcagccgcaccctgcgcggccgccgtggtgcgcaactgactgccgtgaccagcggcggc accatcccggacaacgccgactacagcgtgctgctggaaccgcagggcctgaacattggc agcgtcaacgaagacttcgccgtggaaagcattgctggcgacgtgtttcaactcggcaac acctcctatcgcatcctgcgggtggaaaccggcaaggtgcgggtcgaagatgccctgggc cagccgccgaccattccgttctggctcggcgaagccccggggcgcagcgatgagttgtct tcggcggtggcgcgcctgcaagcaaccctcgacgaattgctcagcagccgccccggcgat ctgcaaccggcgctcgactggctgaccgcaaccctcggcctgaaccgcgccagcgccgaa caactggtggagtatctgtcccgcgcacgcctgaccctcggcgccctgccctcacaggac acgctgctgatggagcggtttttcgacgagtccggcggcacccagttgatcatccattca ccgttcggcagccgcatcaaccgcgcctggggcctggcgctgcgcaagcgtttctgccgc accttcaacttcgaattgcaagccgccgccagtgaagatgcgatcgtcctgtcgctgtcc accagccacagtttcgaacttgatgacgtctggcgttacctgcacagcaacagcgccgag cacatcctgattcaagcgattctggacgcgccattgttcggcgtgcgctggcgctggaat gccggggtggcgctggcgttgccgcggtttaccggcgggcgcaaagtcgcgccgcagttg cagcggatgaaaagcgaagacctgatcgccagcgtgtttccggaccagatcgcctgcctg gaaaacctcgccggcgaacgggaagtccctgaacacccgctggtggaacagaccctcgac gactgcctgcacgaggccatggacagcgaaggctggctgcagttgctgcggcgcatggag cgtggcgaagtgcgtttgctcagccgcgatctgccggcgccgtcaccgctggcggcagaa attctcagtgcgcggccgtacacctttctcgacgacgcaccgctggaggaacgccggacc caagccgtgatcaaccggcgctggagcgatccgcaatccaccgatgacctcggtgcactg gatgccgatgccatcgacgccgtgcgcgaagaggcgtggccgacgccggccaatgtcgat gaaatgcacgaggcgctgatgagtctggcatgcgtcagcgaggccgaagtgcaggccaac cagccttggcgcgagtggctgaacacactgactgacggtggccgcgcctgctgtctgatg atcgatccacaacgttgcctgtggctggcgcgagagcgcctgacctgcctgttggccctt tatccacaggccacgctgcaaccgcagcaggaggccttacccggtttcaatgaaccctgg acgttcgatgaggccctggtcgaaatgatccgcgcgcggctcggcgcgtttggcccgctg ccgttaccggcgattgccgagccgctggcgctgcccaccgcgcaagtcgcacaagccctc gcgcaactggagcgcgaaggctacgtgctgcgtgggcatttcaccccgggcgtggcggtt gaagaatggtgcgaacggcatctgctggcgcgcatccatcgctacacggtcaagcgtttg cgccgggaaatcgagccggtggcgttgcaggatttcatgcgttttctgttcgattggcag cacctgtccaacgccacgcgcggtcagggcagcgcggtgttgccagcgattgtcggccag ttcgaaggctatccggcggcggcctccgcgtgggacagcgacattctcccggcgcggctc aaggactattcaccgagctggctggatgacctgtgccgcaacggcaaactggtgtggacg cggctcagtgcccggcagaaagtcagcggtacggccctgcgcagtacaccgattgtgctg ctgccacgtagccaggtcggattgtggagtgcgctggccgagcaaacgccggtcagtgaa ctgtcgccgaaaacccggaaggtccatgaagcactgagtcagcatggcgcgctgtttttc gatgagttgatccacgaagcgcacctgttgcgcaccgagctggaaatcgccttgcaggaa ctggtcggtgccggcctggtgaacgccgacagcttcgccggcctgcgcgcgctgatcacc ccggcgagcaagcgccagcaacgcagcagtcgacgtggacgcggggcgtttgtcggcggt atggacgatgccggacgctgggcgttgttgcgtcgagggccactggtggagaaccaccag agcgtttcgccggaaaccctcgaacacgtcgccatgaccttgctgcggcgctacggcgtg gtgttctggcgcctgctggaacgcgaggcggattggctgccgagctggcgtgaattgctg cgcacgtttcatcgactggaggcccgtggcgagattcgcggcgggcgctttgtcagtggt ctggcgggtgaacaatttgccttgccggaggcgattccattgctgcgtgaagtacggcgg cggccgcatgacggcagtttgatcgcggtgtgcggggtggatccgctgaatctggccggg acgttgttgccgggggtgaaagtgccggcactggcgagcaatcggctggtgtatcgcgat ggtcttccggcggcggccgagattgccggcaaacagcagatctggctggagctggaccaa gtatccatggaacaggtgcgcggcaagctgatccggcattga

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