KEGG   Pseudomonas serboccidentalis: NN484_13830
Entry
NN484_13830       CDS       T10180                                 
Symbol
vapC
Name
(GenBank) tRNA(fMet)-specific endonuclease VapC
  KO
K18828  tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
Organism
plis  Pseudomonas serboccidentalis
Brite
KEGG Orthology (KO) [BR:plis00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:plis03016]
    NN484_13830 (vapC)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:plis02048]
    NN484_13830 (vapC)
Transfer RNA biogenesis [BR:plis03016]
 Prokaryotic type
  tRNA degradation factors
   NN484_13830 (vapC)
Prokaryotic defense system [BR:plis02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    NN484_13830 (vapC)
SSDB
Motif
Pfam: PIN PIN_3
Other DBs
NCBI-ProteinID: WDR33600
LinkDB
Position
complement(3011026..3011433)
AA seq 135 aa
MIKYMLDTNICIFTIKNKPQICREAFNRHSGQLCISAITLMELIYGAEKSAVPEKNLSVV
EGFVARLEVLPFDGDAAAQAGMIRSELAKAGTPIGPYDQMIAGHARSQGLIVVTNNVREF
ERVPGLRIEDWVHPD
NT seq 408 nt   +upstreamnt  +downstreamnt
atgatcaaatacatgctggataccaacatctgcattttcacaatcaaaaacaaaccacag
atttgtcgcgaagcgttcaatcgccattccggacagttgtgcatcagcgctatcacgctc
atggagcttatctacggcgctgaaaagtcggcagttcccgaaaaaaatctttcagttgtc
gaaggattcgtcgcacgactggaagtattaccttttgacggtgatgcagcagcacaagcc
ggaatgattcgatctgaactggcgaaagcaggaacgcctattggcccctatgaccaaatg
atcgcaggtcatgcgcgctcacaaggacttattgtggtgacgaacaatgtgcgggaattt
gaacgtgttcccggattgcgcatagaagattgggtgcaccctgactaa

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