Pseudomonas serboccidentalis: NN484_18360
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Entry
NN484_18360 CDS
T10180
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
plis Pseudomonas serboccidentalis
Pathway
plis00071
Fatty acid degradation
plis00280
Valine, leucine and isoleucine degradation
plis00310
Lysine degradation
plis00362
Benzoate degradation
plis00380
Tryptophan metabolism
plis00410
beta-Alanine metabolism
plis00640
Propanoate metabolism
plis00650
Butanoate metabolism
plis00907
Pinene, camphor and geraniol degradation
plis00930
Caprolactam degradation
plis01100
Metabolic pathways
plis01110
Biosynthesis of secondary metabolites
plis01120
Microbial metabolism in diverse environments
plis01200
Carbon metabolism
plis01212
Fatty acid metabolism
Module
plis_M00087
beta-Oxidation
plis_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
Enzymes [BR:
plis01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
NN484_18360 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
NN484_18360 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
NN484_18360 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
NN484_18360 (fadB)
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NCBI-ProteinID:
WDR34461
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Position
complement(4020595..4022742)
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVDTIKADASIKGVIVSS
GKDVFIVGADITEFVENFKLPDAELVAGNLEANKIFSDFEDLNVPTVAAINGIALGGGLE
MCLAADYRVMSTKAKIGLPEVKLGIYPGFGGTVRLPRLIGVDNAIEWIAAGKENRPEDAL
KVSAVDAVVAPEKLQEAALELIKRAISGEFDYKAKRQPKLEKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAAQSLIGLFLNDQEL
KKKAKAYDEIAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKL
LVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQAVLAEVEDKVK
EDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSELAIATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDVLYEAKRLGQKNGKGFYAYEADKKGKQ
KKVADPSVLEVLKPIVYEQREVTDEDIINWMMIPLCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADQYADLGALYHPTAKLREMAKNGQSFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaagctcttgaaagtggcatcgtcgaattg
aaattcgacctcaagggtgagtccgtcaacaagttcaaccgtcttaccctgaacgaactg
cgtcaggccgtggacaccatcaaggcagatgcttcgatcaagggcgtgatcgtcagcagt
ggcaaggacgtgttcatcgtcggcgccgacatcaccgaatttgtcgagaacttcaagctg
ccggatgccgagctggttgctggcaatctcgaagccaacaagatcttcagcgatttcgaa
gacctcaacgttccgaccgtggctgcgatcaacggcattgccctcggtggcggtctggaa
atgtgcctggcagcggactaccgcgtcatgtcgaccaaggccaagatcggcctgccggaa
gtcaaactgggcatctacccaggcttcggcggtaccgtgcgtctgccgcgcctgatcggc
gtcgataacgccatcgagtggattgccgccggcaaggaaaaccgccctgaagacgcgctg
aaagtcagcgccgtcgacgccgtggttgctcccgagaagctgcaggaagctgcccttgaa
ctgatcaagcgcgctatctccggcgagttcgattacaaggccaagcgtcagccgaaactt
gaaaaactcaagttgaacgccattgaacaaatgatggccttcgaaaccgccaaaggtttc
gtggccggtcaggctggcccgaactacccggcgccggttgaagcgatcaagaccatccag
aaagccgcgaacttcggtcgtgacaaggcgctggaagtcgaagccgccggtttcgtcaaa
ctggccaagacttctgccgcgcagagcttgatcggtctgttcctgaacgatcaggaactg
aagaaaaaggccaaggcctacgacgaaatcgccaaggacgtgaagcaggctgccgtactg
ggcgccggcatcatgggtggcggtatcgcctatcagtcggcctccaaaggtacgccgatc
ctgatgaaggacatcaacgagcacggtatcgagcagggcctggctgaagccgccaagctg
ctggttggccgcgttgacaaaggtcgcatgaccgccgcgaaaatggctgaagtgctcaac
ggcattcgtccgaccctgtcctacggcgacttcggtcacgtcgacctggttgtagaagcc
gtggtcgagaacccgaaggtcaagcaagccgtgctggctgaagtcgaagacaaggtcaaa
gaggacaccatcctcgcgtccaacacctcgaccatttccatcagcctgctggccaaggcc
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaatccggtgcacatgatgccg
ctggtggaagtgatccgtggcgagaagtccagcgagctggcgattgcaaccaccgttgcc
tacgccaagaaaatgggcaagaacccgatcgtcgtcaacgactgcccgggcttcctggtc
aaccgcgttctgttcccgtacttcggcggtttcgccaagctggtcagcgccggtgtggac
ttcgtccgtatcgacaaggtcatggaaaaattcggctggccgatgggcccggcgtacctg
atggacgtagtcggtatcgacaccggtcaccacggtcgtgacgtcatggctgaaggcttc
ccggatcgcatgaaggatgaccgtcgctcggccatcgacgtgctttacgaagccaagcgt
ctgggccagaagaacggcaagggcttctacgcctacgaagccgacaagaaaggcaagcag
aagaaagtcgccgatccgtcggtgctggaagtgctcaagccgatcgtttacgagcagcgc
gaagtcactgacgaagacatcatcaactggatgatgatcccgttgtgcctggaaaccgtg
cgttgcctggaagacggcatcgttgaaaccgccgccgaagccgacatgggtctggtctac
ggtatcggtttccctccattccgtggcggtgcgctgcgctacatcgattcgatcggtgtt
gccgagttcgttgccctggctgaccagtacgctgatttgggcgcgctgtaccacccgacc
gcgaagctgcgcgaaatggccaagaacggccaaagcttcttcggttaa
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