KEGG   Pseudomonas serboccidentalis: NN484_18720
Entry
NN484_18720       CDS       T10180                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
plis  Pseudomonas serboccidentalis
Pathway
plis00010  Glycolysis / Gluconeogenesis
plis00020  Citrate cycle (TCA cycle)
plis00260  Glycine, serine and threonine metabolism
plis00280  Valine, leucine and isoleucine degradation
plis00310  Lysine degradation
plis00380  Tryptophan metabolism
plis00620  Pyruvate metabolism
plis00630  Glyoxylate and dicarboxylate metabolism
plis00640  Propanoate metabolism
plis00670  One carbon pool by folate
plis00785  Lipoic acid metabolism
plis01100  Metabolic pathways
plis01110  Biosynthesis of secondary metabolites
plis01120  Microbial metabolism in diverse environments
plis01200  Carbon metabolism
plis01210  2-Oxocarboxylic acid metabolism
plis01240  Biosynthesis of cofactors
Module
plis_M00009  Citrate cycle (TCA cycle, Krebs cycle)
plis_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
plis_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
plis_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
plis_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:plis00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    NN484_18720 (lpdA)
   00020 Citrate cycle (TCA cycle)
    NN484_18720 (lpdA)
   00620 Pyruvate metabolism
    NN484_18720 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    NN484_18720 (lpdA)
   00640 Propanoate metabolism
    NN484_18720 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    NN484_18720 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    NN484_18720 (lpdA)
   00310 Lysine degradation
    NN484_18720 (lpdA)
   00380 Tryptophan metabolism
    NN484_18720 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    NN484_18720 (lpdA)
   00670 One carbon pool by folate
    NN484_18720 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:plis04147]
    NN484_18720 (lpdA)
Enzymes [BR:plis01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     NN484_18720 (lpdA)
Exosome [BR:plis04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   NN484_18720 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 FAD_oxidored HI0933_like GIDA NAD_binding_8 FAD_binding_3 AlaDh_PNT_C Thi4 DAO 3HCDH_N 2-Hacid_dh_C Amino_oxidase
Other DBs
NCBI-ProteinID: WDR34531
LinkDB
Position
complement(4099323..4100759)
AA seq 478 aa
MSQKFDVVVIGAGPGGYVAAIKAAQLGLTTACIEKYTDAEGKQALGGTCLNVGCIPSKAL
LDSSWKYKEAKESFNVHGISTGEVKMDVAAMVGRKAGIVKNLTGGVATLFKANGVTSIQG
HGKLLAGKKVEVTKPDGSVEVIEAENVILAPGSRPIDIPPAPVDQNVIVDSTGALEFQSV
PKRLGVIGAGVIGLELGSVWSRLGAEVTVLEALDTFLMAADTAVSKEALKTLTKQGLDIK
LGARVTGSKVNGDEVVVNYTDANGEQTITFDKLIVAVGRRPVTTDLLAADSGVTLDERGF
VHVDDHCATTVPGVYAIGDVVRGMMLAHKASEEGIMVVERIKGHKAQMNYDLIPSVIYTH
PEIAWVGKTEQALKAEGVEVNVGTFPFAASGRAMAANDTGGFVKVIADAKTDRVLGVHVI
GPSAAELVQQGAIGMEFGTSAEDLGMMVFSHPTLSEALHEAALAVNGGAIHIANRKKR
NT seq 1437 nt   +upstreamnt  +downstreamnt
atgtcgcagaaatttgacgtagtagtgatcggtgccggccctggcggctatgtagctgcc
atcaaggccgcgcagttgggtctcaccactgcctgcatcgagaagtacaccgacgctgaa
ggcaagcaagccctcggcggtacttgcctgaacgtcggctgcattccgtccaaggcgctg
ctggacagctcctggaagtacaaggaagccaaagagagcttcaacgttcacggtatctcg
accggcgaagtcaaaatggacgtcgctgcgatggttggccgcaaggctggcatcgtcaag
aacctgaccggcggcgttgccaccctgttcaaggccaacggcgttacttcgatccagggc
cacggcaaactgctggcaggcaagaaagtcgaagtcaccaagccggacggctcggttgaa
gtcatcgaagctgaaaacgtcatcctggctccaggttcgcgtccgatcgacattccaccg
gctccggtcgatcagaacgtcatcgtcgattcgactggcgcgctggaattccagtccgta
cccaagcgtctgggcgtgatcggcgctggcgtgatcggtctggaactgggttcggtctgg
tcgcgtctgggtgcagaagtgactgtcctggaagccctggacactttcctgatggcagct
gacaccgctgtttccaaggaagcgctgaaaaccctgaccaaacagggtctggacatcaag
ctgggcgctcgcgtaaccggttcgaaagtgaatggcgacgaagtcgttgtgaactacacc
gatgccaacggcgaacagaccatcactttcgacaagctgatcgtagccgttggtcgccgt
ccggtgaccactgatctgctggctgccgacagcggcgtgaccctggacgagcgcggtttc
gtgcacgttgacgatcactgcgccaccaccgtaccgggcgtctacgccattggtgacgtg
gttcgcggcatgatgctggctcacaaagcctcggaagagggcatcatggttgtcgagcgc
atcaagggtcacaaagcccagatgaactatgacctgatcccttcggttatttatactcac
ccggaaatcgcgtgggttggcaaaaccgagcaggccttgaaagccgaaggcgttgaagtt
aacgtcggcaccttcccgttcgccgcttccggccgtgccatggccgccaacgataccggt
ggtttcgtcaaggtcatcgcggatgccaagactgaccgcgtattgggcgtgcacgtgatt
ggcccgagcgctgcagaactggttcagcagggcgcgatcggtatggaattcggcaccagc
gctgaagacctgggcatgatggttttctcccatccgaccctgtctgaagccttgcacgaa
gctgctctggctgtgaatggcggcgccatccacattgccaaccgcaagaagcgttaa

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