Pseudomonas serboccidentalis: NN484_21340
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Entry
NN484_21340 CDS
T10180
Symbol
selB
Name
(GenBank) selenocysteine-specific translation elongation factor
KO
K03833
selenocysteine-specific elongation factor
Organism
plis Pseudomonas serboccidentalis
Brite
KEGG Orthology (KO) [BR:
plis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
plis03012
]
NN484_21340 (selB)
Translation factors [BR:
plis03012
]
Eukaryotic type
Elongation factors
NN484_21340 (selB)
Prokaryotic type
NN484_21340 (selB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
Beta-barrel_SelB
WHD_3rd_SelB
WHD_2nd_SelB
WHD_2nd_SelB_bact
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
SRPRB
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
WDR38879
UniProt:
A0ABY7ZGE2
LinkDB
All DBs
Position
4681145..4683061
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AA seq
638 aa
AA seq
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MIVGTAGHIDHGKTSLLQALTGQTGDRRPQERERGMTIDLGYLYAELEPGAGLTGFIDVP
GHEKFTHNMLAGAQGIDLVLLVVAADDGVMPQTREHLAIVQLLGIPRALVAITKCDRAET
GRVEQVQRQILDLLETGPFAEAPILTVSSVTGQGIDALRQNLLQTQGEVHERSREGGFRL
AIDRAFSVAGAGIVVTGTALSGTVSAGDKLALGPSGKSVRVRGLHAQNQAAEQAFAGQRV
ALNISGERLTLEQIHRGQWLLAEWLHAPTQRVDIEFQLLPGERTFEHFHPVHVHLGTQDV
IARVALLEGPRLSPGQRMFAQLLINAPVHAVKGDRVILRDQSAQRTLGGGQVLDPFAPAR
QRRSPERLAQLQALARSDSLEQALPVLLNHGTGGLDPQRLERQFNRPRADWSLAANVRLI
DTRQGPVLFNVQRWGQLKFTLLQHLAKFHELEPDQMGPDRDRLRRFSGLALERSTFASLL
EELRTTGSINASGPWLHLPDYQVRLNAEDETLWQRMQPLFEQAGYDPPWVRDVAKILGED
DAVVRLLLRKLARLGLMHQVVRDLFLTDVQLRRMAGVLLQLEQEKPQIQVTTFRDALGLG
RKRCIQYLEYFDRLGLTRRIGESRVIRHDNALASADAP
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgtcggcacggcggggcacatcgaccacggcaaaacctcgctgctgcaggccctg
accggacaaaccggcgaccgccgcccgcaggagcgcgaacgcgggatgaccatcgacctc
ggttatctgtatgcagaactggaaccgggtgcggggttgaccgggtttatcgatgtgccg
ggccatgaaaaattcacccataacatgctcgccggggcgcagggcatcgatctggtgttg
ctggtggtggccgcggacgacggggtcatgccgcaaacccgagagcatctggcgatcgtc
cagttgctgggaattccccgggcgctggtggcgatcaccaaatgtgaccgggccgagacg
ggcagggtggagcaagtacagcggcagattctcgatctgctggaaaccgggccgtttgcc
gaggcgccgattctgactgtgtcgagcgtgaccgggcagggcatcgatgcattgcgccag
aacttgttgcagacacagggcgaagtgcatgagcgcagtcgcgaaggcggattccgtctg
gccatcgaccgcgccttcagcgtggccggcgccgggatcgtggtcaccggcacggcgttg
tcgggtacggtgtcagccggcgacaaactcgccctcggaccatccggtaaatcggtgcgg
gtgcggggtttgcacgcgcagaaccaagccgccgaacaggcctttgccgggcaacgcgtg
gcactgaatatcagcggcgaacggctcacgctggagcagatccatcgcggccaatggctg
ttggccgagtggctgcacgcaccgacgcagcgggtcgacatcgaatttcagctgttgccc
ggtgagcgcacgttcgaacactttcatccggtgcatgtgcacctcggcacccaggacgtc
atcgctcgcgtggccttgctcgaaggcccgcgcttgagtcccggccagcgcatgttcgcg
caactgctgatcaatgcgccggtgcacgcggtgaagggcgatcgcgtgatcctgcgtgat
cagagcgcccaacgcactttgggcggcggccaggtgctcgacccgttcgccccggcccgg
caacgccgcagcccggaacggctggcgcagctgcaagccctggcgcgcagcgacagcctg
gaacaggcgctgccggtgttgctcaaccacggcaccggcggcctcgatccgcagcggctg
gagcgccagttcaatcgcccgcgtgccgactggtcgctggcggccaacgtgcgcctgatc
gacacccgccaaggcccggtgctgttcaatgtccagcgttgggggcagttgaagttcacc
ctgttacagcacttggcaaaattccatgaactggaacctgaccagatgggaccggatcgg
gaccgtctacggcgcttcagtggtctggcgctggaacgctcgacctttgccagtctgctg
gaagaattgcgcaccaccggatcaatcaacgccagcgggccgtggctgcacctgccggat
tatcaggtgcgtttgaacgccgaagacgaaaccctgtggcaacgcatgcaaccgctgttc
gaacaggccggatacgatccgccgtgggtgcgcgatgtcgcgaaaatactcggtgaggac
gacgcggtggtgcgcctgctgctgcgcaaactggcgcgcctgggtttgatgcaccaagtg
gtgcgcgacttgtttctgaccgacgtgcaactgcggcgcatggccggcgtgctgctgcaa
ctggaacaggaaaaaccgcagatccaggtgacaactttccgcgatgcgctaggcttggga
cgcaaacgctgtattcagtacctggaatacttcgaccgcctcggtctgacccgacgcatc
ggcgaatcccgtgtgatccgtcacgacaacgcgctggccagtgccgacgcaccctga
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