Pseudomonas serboccidentalis: NN484_23815
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Entry
NN484_23815 CDS
T10180
Name
(GenBank) lysine decarboxylase
KO
K01584
arginine decarboxylase [EC:
4.1.1.19
]
Organism
plis Pseudomonas serboccidentalis
Pathway
plis00330
Arginine and proline metabolism
plis01100
Metabolic pathways
plis01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
plis00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
NN484_23815
Enzymes [BR:
plis01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
NN484_23815
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Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
WDR35488
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Position
5218822..5221077
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AA seq
751 aa
AA seq
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MYKDLKFPVLIVHRDIKADTVAGDRIRGIARELEQEGFNIVSAIDYAEGRLVASTHHGLA
CMLIAAEDASTHSHLLQNMAELIGLARVRAPDLPIFALGEQVTLENAPADAMAELNQLRG
ILYLFEDTVPFLARQVARAARKYLDGLLPPFFKALVQHTADSNYSWHTPGHGGGVAYHKS
PVGQAFHQFFGENTLRSDLSVSVPELGSLLDHTGPLAEAEERAARNFGADHTFFVINGTS
TANKIVWHSMVGRDDLVLVDRNCHKSVLHAIIMTGAIPLYLCPERNELGIIGPIPLSEFS
RESIQAKIDASPLTKGRAPKVKLAVVTNSTYDGLCYNAELIKQSLGNSVEVLHFDEAWYA
YAAFHEFFAGRYGMATSRTADSPLVFTTHSTHKLLAAFSQASMIHVQDGGARQLDRDRFN
EAFMMHISTSPQYSIIASLDVASAMMEGPAGRSLLQETFDEALSFRRALANLRQHIAADD
WWFSIWQPPGVEGIDRVQTEDWLLQPDADWHGFGEVSDDYVLLDPIKVTLVMPGLNAGGA
LSEKGIPAAVVSKFLWERGLVVEKTGLYSFLVLFSMGITKGKWSTLLTELLEFKRSYDAN
VSLASCLPCVAQQDTARYRGMGLRDLCDQLHACYRSNATAKHLKRMYTVLPEIAMKPAHA
YDHLVRGEVEAVPIDELEGRIAAVMLVPYPPGIPLIMPGERFTESTRSIIDYLKFARTFD
SSFPGFVADVHGLQHEDEGNGRQYTVDCVKE
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgtacaaagatttgaagttcccggtgttgatcgtccaccgcgacatcaaggccgacacg
gtcgccggtgaccggatccggggcatcgcccgggagttggagcaggaaggtttcaatatc
gtgtcggccatcgactacgccgaagggcggttggtggcgtcgacccatcatggtctggcg
tgcatgctgatcgctgccgaagacgccagcacccactcgcacttgctgcagaacatggcc
gaactgatcggtctggcccgggtgcgggcgccggatctgccgatctttgccctgggcgaa
caggtcaccctggaaaacgccccggccgatgccatggccgagcttaatcaactgcgcggc
attctttatctgttcgaagacaccgtgccgttcctggcccggcaagtggcgcgagcggcg
cgcaagtatctggatggtctgctgccaccgtttttcaaggcactggtgcagcacaccgcc
gattccaactattcctggcacacccccggtcatggcggtggcgtggcgtatcacaagagc
ccggtggggcaggcgtttcatcagtttttcggcgaaaacaccctgcgttcggatttgtcg
gtatcggtgccggagctcggttcactgcttgatcacaccggcccgttggccgaagccgaa
gagcgtgcggcgcgcaatttcggcgccgatcacaccttcttcgtgatcaatggcacctcg
accgccaacaagatcgtctggcactcgatggttggtcgtgatgacctggtgctggtggac
cgcaactgccacaaatcggtgttgcacgcgatcatcatgaccggggcgatcccgctgtac
ctgtgcccggagcgcaatgaactggggatcatcggcccgattccgctgagcgaattcagc
cgcgaatcgatccaggccaagatcgacgccagccccctgaccaaggggcgcgcgccgaaa
gtcaaactggcggtggtcaccaactcgacttacgacggcttgtgttacaacgccgagctg
atcaagcaaagcctgggcaacagcgtcgaagtgctgcatttcgatgaagcgtggtatgcc
tacgcggcgtttcacgagttcttcgccgggcgctatggcatggccacttcgcgcacggca
gacagcccgctggtgttcaccacccattccacgcacaagctgctcgccgcgttcagccag
gcctcgatgatccatgtacaggacggcggcgcgcggcaactggaccgtgaccgtttcaat
gaagcgttcatgatgcacatctcgacctcgccgcaatacagcatcatcgcctcgctggac
gtggcctcggcgatgatggaaggcccggccggacgttcgctgttgcaggaaaccttcgat
gaagccctgagttttcgtcgtgcgctggccaatctgcgccagcacatcgctgcggatgac
tggtggttttcgatctggcagccacctggcgtcgaaggcatcgaccgcgtacaaaccgaa
gactggctgttgcagccggacgccgactggcacggcttcggcgaggtcagcgacgactac
gtgctgctcgatccgatcaaggtgaccctggtcatgcccggcttgaatgccggtggcgcg
ctgagcgagaagggcatcccggcggcggtggtcagcaagttcctctgggagcgcgggctg
gtggtggagaaaaccgggctgtattcatttctggtgctgttctcgatgggcatcaccaag
ggcaagtggagcacgctgctcaccgagttactcgaattcaagcgcagttacgacgccaac
gtcagtctggcgagctgcctgccctgtgtcgcgcagcaagacaccgcacgctatcgcggc
atgggcctgcgggatttgtgcgatcaactgcacgcctgttaccgcagcaatgccaccgcc
aaacacctcaagcgcatgtacacggtgctgccggaaatcgccatgaaaccggcgcatgcc
tacgatcatctggtgcgcggcgaggtcgaggcggtgccgatcgatgagctggaggggcgg
attgcggcggtgatgctggtgccgtatccgccgggcattccattgatcatgcccggcgaa
cgctttaccgagtcgacgcgctcgatcatcgattacctgaagtttgcccgcacgttcgat
agcagcttccccggttttgtcgctgatgtgcatggactgcaacatgaagatgaaggcaat
ggacggcagtacaccgtcgattgcgtcaaggaatga
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