Pseudomonas serboccidentalis: NN484_25980
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Entry
NN484_25980 CDS
T10180
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
plis Pseudomonas serboccidentalis
Brite
KEGG Orthology (KO) [BR:
plis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plis03400
]
NN484_25980 (phrB)
Enzymes [BR:
plis01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
NN484_25980 (phrB)
DNA repair and recombination proteins [BR:
plis03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
NN484_25980 (phrB)
Prokaryotic type
NN484_25980 (phrB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
CAP59_mtransfer
Motif
Other DBs
NCBI-ProteinID:
WDR35900
LinkDB
All DBs
Position
5703778..5705223
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AA seq
481 aa
AA seq
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MQLIWLRSDLRQHDNTALAAAAARGPTVAVYLLSPRQWLEHDDAACKVDFWLRNLRELSS
ALGERNIPLLIRTADHWDQAPVVLVELCRQLNVEAVHVNEEYGVHESRRDAAVAQALKTT
GIAFHSYLDQLLFKPGTVLTKTETYFQVFSQFRKVCYERLHRSVPGLIKAPGKQAKLNID
SDPVPASVEGFAAPSESLRALWPAGEQQARRRLDTFADAQIDYYQSERDFPAKPGTSQLS
AYLAAGVISPRQCLHAALQSNQGEFDSGKVGAVTWINELLWREFYKHILVGYPRVSRHRA
FRPETEAVAWRNAPDELAAWQEARTGLPIIDAAMRQLLETGWMHNRLRMVVAMFLTKNLL
IDWREGERFFMRHLIDGDLAANNGGWQWSASTGTDSAPYFRIFNPLSQSEKFDSEGLFIK
HWLPELAGLNKKEVHNPASVGGLFGVADYPAPIVNLGASRERALAAFKNLPSRSSMGEVH
E
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcaattgatctggctgcgcagcgacctgcgccaacatgacaacaccgccctcgcggcc
gccgcagcgcgcgggccgacggttgccgtgtatctgttgagcccacggcagtggctggag
catgacgatgccgcgtgcaaggtcgatttctggctgcgcaatctgcgtgaactgagcagc
gccctcggcgagcggaacatcccgttgctgatccgcaccgctgaccattgggatcaggcc
ccggtggtgctagtcgagctttgccggcaactgaacgtcgaggcggtgcacgtcaacgaa
gaatacggcgtccacgaaagccgtcgcgatgcggcggttgcccaggccctgaaaaccaca
ggcatcgcctttcacagttaccttgaccaactgctgttcaagcccggcacggtactgacc
aagacagagacctactttcaggtgttcagccagttccgcaaggtctgctacgaacgcctg
caccgctcggtgcccgggctgatcaaagcacccggcaaacaggcgaagctgaacatcgac
agcgatccggtgcctgcatccgtcgaaggttttgcagcgccgagcgaatcattacgcgcc
ctgtggcctgctggcgaacagcaagcccggcgccgactcgacaccttcgccgacgcgcag
atcgactactaccagagcgaacgcgacttcccggccaagcccggcaccagtcaactctcg
gcctatctggccgccggggtgatctcgccgcgccaatgcctgcacgccgcgctgcaaagc
aatcagggcgagttcgacagcggcaaggtcggtgcggtgacctggatcaacgagctgctg
tggcgcgagttctacaagcacattctggtcggctatccacgggtctcgcgccatcgcgcg
tttcgcccggaaaccgaggccgtggcctggcgcaacgcgccggacgaactggccgcgtgg
caagaggcacgcaccggtttgccgatcatcgatgcggccatgcgccaactgctggagacc
ggctggatgcacaaccgcctgcggatggtggtggcgatgttcctgaccaaaaacctgctg
atcgactggcgagaaggcgagcgttttttcatgcgtcacctgatcgacggcgatctggcg
gcgaacaacggcggctggcagtggagcgcttcgaccggcaccgattcggcaccgtatttc
cgcattttcaacccgctgagccaatcggaaaaattcgacagcgaaggcctgttcatcaag
cactggttgcctgagctggccggcctgaacaaaaaggaagtacacaacccggccagcgtc
ggcggactgttcggcgttgcggattatccggcgccgatcgtcaatctcggggcttcgcgc
gaacgcgcgctggcggccttcaagaatctgccgtcgcgctcgtccatgggagaggtccat
gagtga
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integrated database retrieval system
