Pseudomonas serboccidentalis: NN484_26835
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Entry
NN484_26835 CDS
T10180
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
plis Pseudomonas serboccidentalis
Pathway
plis02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
plis00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NN484_26835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plis03021
]
NN484_26835
Transcription machinery [BR:
plis03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NN484_26835
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
PhyR_sigma-like
Sigma70_r4
HTH_29
HTH_23
GerE
HTH_24
MPAB_Lcp_cat
HTH_40
HTH_Tnp_ISL3
HTH_11
DUF6362
FeoB_Cyto
PapC_N
DUF6604
Motif
Other DBs
NCBI-ProteinID:
WDR36061
UniProt:
A0ABY7Z8P9
LinkDB
All DBs
Position
complement(5897708..5898208)
Genome browser
AA seq
166 aa
AA seq
DB search
MSSPEFAVQALYSSHHGWLNAWLRARLGNAADAADLAQDTFVRLLQRTERLELKAPRAFL
RTIARGLVIDHWRREEIERAYLEAIAHLPEAETPSAEARALVIELLESVARMLEGLRPKV
RQAFLLAQCEGLTHKQIAEQMGLSLRSVERYVADALYHCYVLRYAS
NT seq
501 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcacctgagtttgcagtgcaggcgctttacagtagtcatcacggctggctcaac
gcctggctgcgggcgcggctgggcaatgccgcggacgcggcggatctggcgcaggacacg
ttcgtgcgcctgttgcaacgcaccgaacgcctggagctcaaggcgccgcgcgcttttttg
cgtaccatcgcccgcggtctggtaatcgaccattggcgccgtgaagaaatcgaacgcgcc
tatctcgaagccatcgcccacttgcccgaagccgaaaccccgagtgccgaggcccgcgcc
ctggtaatcgaattgctcgaaagcgtcgcgcgcatgctcgaaggcctgcggccgaaagtg
cgtcaggcgtttctgctggcgcagtgcgaaggtttgacccacaagcagatcgccgagcag
atgggtttgtcgctgcgctcggtggagcgttacgtcgccgatgcgctgtatcactgctac
gtgttgcggtacgcaagctga
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integrated database retrieval system
