Pseudomonas serboccidentalis: NN484_27020
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Entry
NN484_27020 CDS
T10180
Name
(GenBank) retention module-containing protein
Organism
plis Pseudomonas serboccidentalis
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LapA
DarA_N
Motif
Other DBs
NCBI-ProteinID:
WDR36096
UniProt:
A0ABY7ZAA0
LinkDB
All DBs
Position
complement(<5943781..5950911)
Genome browser
AA seq
2377 aa
AA seq
DB search
MSSVVAIVKSIVGQVFVVSPEGVRRVLVEGDRLFVGDQIDTGLSGAVSLELADGRTLDLG
RETQWSANAPDSSTDLAEATAQAAPSVAELQQAIAAGVDPTTALEATAAGATAAGTGGAA
GGGHSFVMLDATAGRVDPTIGFPTAGINSGAQAAQNITGGQTTDTTSNALRESTLSLSAT
PTITEAGGVLVYTATLTQAPLTDLTITLSNGSVIVIPAGSTTGTVNVPLAPNDTVYNDPT
QIDVTVTGTTGGNGITVTPPTTPATTQVTDTIDTTTVTLTAGNSVTEGGQITYTATLTNP
AQTPVTVTLSNGSTITIEAGQTTGTVNVPTPPNDVYNNGSTVSTTITGATGGNFENLVPN
TTPAVTTITDSIDTTNLTLTATGTVVEGGQITYTATLTNPAQTPVTVTLSNGSTITIEAG
QTTGTVNVPTAPNDVYNNGGTVSTTITGATGGNFENLVPNTTPATTTVTDSIDTTNLSLS
ATGTVAEGGSIVYTATLTNPAGTPVTVTLSNGSVITIEAGKTTGTVTVPAPADDVYKDAG
KVEVSITGTTGGNFENLVPSTVPAVTDVTDTIDTSTVKLTADTSVAEGGTVTYTATVGAP
VTGSPVTVTLTNGQTITIEVGKTTGTVTTTAPNDALTGNPPLTNAITNVSGGNYENLVAD
KTPVSTTVTDTVDTTDLSLSATGTVAEGGSIIYTATLTNAAGSPVTVTLSNGAVITIEAG
KTTGTVTVPAPADDVYKDAGKVEVSINGATGGNFENLVPSTVPAVTEVTDTIDTTTVKLS
ADTSVAEGGTVTYTATVGAPVTGSPVTVSLANGQTITIEVGKTTGTVTTTAPNDVLNGQV
PLSNSITGVTGGNYENLVSDKTPVSTTVTDTVDTTNLTLSATGSVAEGGSIVYTATLTNP
AGTPVTVTLSNGSVITIEAGKTTGTVTVPAPADDVYKDAGKVEVSITNTAGGNFENLVPS
TVPAVTDITDTIDTSTVKLTADTSVAEGGTVTYTATVGAPVTGSPVTVTLANGQTITIEV
GKTTGTVTTAAPNDALNGHEPLTNAITEVSGGNYENLVADKTPVSTTVTDTVDTTNLTLT
ATGTVAEGGSIVYTATLTNPAGTPVTVTLSNGSVITIEAGKTTGTVTVPAPADDVYKDAG
KVEVSIKDASGGNFENLVPSAVPAVTEVTDTIDTSTVKLTADTSVAEGGTVTYTATVGAP
VTGSPVTVTLANGQTITIEVGKTTGTVTTTAPNDALTGHEPLSNSITGVTGGNYENLVAD
KTPVNTTVTDTVDTTNLTLSATGTVAEGGSIVYTATLTNPAGTPVTVTLSNGSVITIEAG
KTTGTVTVPAPADDVYKDAGKVEVSIKDASGGNFENLVPSTVPAVTEVTDTIDTSTVKLS
ADTSVAEGGTVTYTATVGAPVTGSPVTVTLANGQTITIEVGKTTGTVTTTAPNDALNGHE
PLSNSITDVTGGNYENLVADKTPVATTVTDTVDTTNLSLSATGTVAEGGSIVYTATLTNP
AGTPVTVTLSNGSVITIEAGKTTGTVTVPAPADDVYKDAGKVEVTIKDAAGGNFENLVPS
TVPAVTEVTDTIDTTTVKLTATETAAEGGTVTYTATVGAPVTGSPVVVTLANGQSITIEV
GKTTGTVTTTAPNDALTGHEPLTNSITGVTGGNYENLVADKTPVNTTVTDTVDTTNLSLS
ATNSVAEGGSITYTATLTNAAGSPVTVTLSNGSVITIEAGKTTGTVTVPAPADDVYKDAG
KVEVTIKDASGGNFENLVPSTVPAVTEVTDTIDTSTVKLTATESAAEGGTVTYTATVGAP
VTGSPVVVTLANGQNITIEVGKTTGTVTTIAPNDALNGHEPLTNSITGVTGGNYENLVAD
KTPVSTTVTDTVDTTNLSLTATGTVAEGGSIVYTATLTNPAGTPVTVTLSNGSVITIEAG
KTTGTVTVPAPADDVYKDAGKVEVTIKDASGGNFENLVPSPVPAVTEVTDTIDTSTVKLT
ADTSVAEGGTVTYTATVGAPVTGSPVVVTLANGQTITIDIGKTTGTVTTTAPNDALTGHE
PLNNSITNVSGGNYENLVADKTPVSTTVTDTVDTTNLSLSATPAVNEGGQITYTATLTNA
AGTPVTVTLSNGAVITIDAGKTTGTVTIDAPKDDVYKDAGTVEATIKGATGGDFENLVTS
NTPAVTTVNDTIDTSTVSLTATANVAEGETVVYTATVTAPVTGAPVVVTLSNGQTITIAV
GETTGSVNFVAPNSPLAGGSSLSVAIDKVAGGNYENLVADKTPANTSVSDTVDTTNLNLT
ASDSVAEGGSIVYTATLTNPAGTPVTVTLSNGAVITIEAGKTTGTVTVPAPADDVYKDAG
KVEATISTATGGNFENLVPSTVPAVTNVTDTIDTTTV
NT seq
7131 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtgttgttgccatcgtcaaaagcattgtcggtcaggtattcgtggtatccccc
gagggtgtacgccgggtgctcgttgaaggcgatcgcctgttcgtcggcgaccagatcgac
accggcctctccggcgccgtgtcgctggagctggcggatggccgcaccctggacctgggc
cgcgaaacccagtggagcgccaacgcgccagactccagcactgacctggccgaagccacc
gcgcaggccgcgccttctgtagccgaactgcagcaggccatcgccgccggtgtcgacccg
accaccgcccttgaagccaccgcagccggcgccaccgccgcagggactggcggcgcggcg
ggcggcggccacagtttcgtgatgctcgacgccaccgctggccgcgtcgacccgaccatc
ggcttcccgactgctggcatcaactccggcgcacaagcggcacagaacatcaccggcggc
cagaccaccgacaccaccagcaacgccctgcgtgagtcgaccctgagcctcagcgccacg
ccgaccatcaccgaagccggcggcgtgctggtgtacaccgcgaccctgacccaggcgccg
ctgactgacctgacgatcaccctgtccaacggctcggtgatcgtaattccggccggctcc
accaccggcaccgtcaacgtgccgctggcaccgaacgataccgtttataacgacccgacc
cagatcgacgtgaccgtcaccggcaccactggcggcaacggcatcaccgtgaccccgccg
accaccccggctacaactcaagtcaccgacaccatcgacaccaccaccgtcactctgacc
gctggcaacagcgttaccgaaggcggccagatcacttacaccgcgacgctgacgaacccg
gcgcagacaccggtgaccgtcaccctgtccaatggctcgaccatcaccatcgaagccggc
cagaccacgggcaccgtcaacgtgccgaccccgccgaatgacgtctacaacaacggcagc
acggtcagcaccaccatcaccggtgccaccggcggtaacttcgaaaacctggtgccgaac
acgacaccggcagtgaccaccatcaccgattcgatcgacaccaccaacctgaccctgacc
gccaccggcactgtggttgaagggggtcagatcacctacaccgcgaccctgaccaacccg
gcgcagacaccggtcaccgtcaccctgtccaacggctcgaccatcaccatcgaagccggc
cagaccacgggcaccgtcaacgtgccgaccgcaccgaacgacgtctacaacaatggcggt
accgtcagcaccacgattaccggcgcgactggcggcaacttcgagaacctggtgccgaac
acgacgccagcgactaccaccgtgaccgactccatcgacaccaccaacctgtcgctgagt
gccaccggtaccgtggctgaaggcggttcgatcgtttacaccgcaaccttgaccaacccg
gccggcaccccggtgaccgtgacgttgagcaacgggtctgtcatcaccatcgaagccggt
aaaaccaccggtaccgtgaccgttccggcgcctgccgatgacgtctataaagacgccggc
aaagtcgaagtcagcatcaccggcaccaccggcggcaatttcgagaacctggtgccaagc
accgttccggctgttaccgacgtcaccgataccatcgacacctcgaccgtcaaactgact
gccgatacctcggtcgctgaaggcggcaccgtcacctacaccgccaccgtcggtgcacct
gtaacgggctcgccagtcaccgtcacgctgaccaacggccagaccatcaccatcgaagtc
ggcaaaactaccggcaccgtgaccaccaccgcgccgaacgatgcattgaccggcaatcca
ccgctgaccaacgccatcaccaacgtcagtggcggcaattacgagaacctcgtcgccgac
aaaaccccggtttcgaccactgtcaccgataccgtcgacaccactgacctgtcgctgagc
gcgaccggtaccgtggccgagggcggctcgatcatttacaccgcgaccctgaccaacgcg
gctggctcgccagtcaccgtaaccctgagcaatggcgcggtgatcaccattgaagcgggt
aaaaccactggcaccgtgactgttccggcgcctgccgatgacgtctacaaagacgccggc
aaagtcgaagtgagcatcaacggtgcgaccggtggcaatttcgagaatctggtgccaagt
actgttccagccgtcaccgaagtcaccgacaccatcgacaccaccacagtcaaactgtcc
gctgacacctcggtcgccgagggcggcaccgtcacttacaccgcgactgtcggtgcaccc
gtgaccggttcgccagtcaccgtgagtctggccaacggccagaccatcaccatcgaagtg
ggcaagaccaccggcaccgtcaccaccaccgcgccaaacgacgtgctgaacggccaggtg
ccgctgagcaactcaatcactggcgtgactggtggcaactacgaaaacctcgtgtccgac
aaaaccccggtcagcaccaccgtcaccgacaccgtcgacaccaccaacctgacgttgagc
gccactggctccgtcgctgaaggcggttcgatcgtttacaccgcgaccttgaccaacccg
gccggcaccccggtgaccgtgacgctgagcaacggctctgtcatcaccatcgaagccggc
aaaaccaccggtaccgtgactgttccggcccctgccgacgacgtctataaagatgccggc
aaagttgaagtcagtatcaccaataccgcgggcggcaatttcgagaatctggtgccgagc
accgttccggctgttaccgacatcaccgacaccatcgacacctcgaccgtcaaactgact
gccgatacctcggtggctgaaggtggcaccgtcacctacaccgccacggtgggcgcacct
gtgacgggttcgcctgtgactgtgaccctggccaacggccagaccatcaccatcgaagtg
ggcaagaccaccggcactgtcaccactgctgcaccgaacgatgcgctgaacggtcacgag
ccactgaccaacgcgatcactgaggtgagcggcggcaactacgagaatctggttgccgat
aaaaccccggtttcgaccaccgtcaccgacactgtcgataccaccaacctgacgctgacc
gcgaccggtaccgtggctgagggcggttcgatcgtctacaccgcgaccttgaccaatccg
gccggcaccccggtgaccgtaaccctgagcaatggctccgtcatcaccatcgaagcgggt
aaaaccaccggtaccgtgaccgttccggcgcctgccgacgacgtctacaaagacgccggc
aaggttgaagtcagcatcaaggacgcttctggcggcaacttcgaaaacctcgttccgagc
gctgtccctgcggtcactgaagtgactgacaccatcgacacctcgaccgtcaaactgacc
gccgatacctcggtggccgagggcggcaccgtcacctacaccgccaccgttggcgcgcct
gtgaccggttcgccagtcaccgtgactctggcgaacggtcagaccatcaccatcgaagtc
ggcaaaaccaccggcaccgtgaccaccaccgcgccaaacgatgcgctgaccggtcacgag
ccgctgagcaactcgatcaccggcgtgacaggtggcaattacgagaatctggtggccgat
aaaaccccggtcaacaccactgtcactgacaccgtcgacaccaccaacctgacgttgagc
gcgaccggtaccgtggctgaaggtggttcgatcgtctacaccgcgaccctgaccaatccg
gccggcacccctgtaaccgtgaccctgagcaacggttcggtgatcaccatcgaagccggc
aagaccactggcaccgtaaccgttccggcgccagccgatgacgtttacaaggacgccggc
aaggttgaagtcagcatcaaggacgcttctggcggcaacttcgagaatctggtgccaagc
actgttccggcagtgaccgaggtcaccgacaccatcgatacgtcgaccgtgaagctcagc
gccgatacttcggtggctgaaggcggcactgtcacctacaccgccaccgttggcgcgccc
gtgactggctcgcctgtgaccgtgaccctggcgaacggccagaccatcaccatcgaagtg
ggtaaaaccaccggcaccgtgaccaccaccgcgccaaacgatgcgttgaacggtcatgag
ccgttgagcaattcgatcaccgacgtaacgggcggcaactacgaaaacctcgtcgccgac
aagacaccggtcgccaccactgtcaccgacaccgtcgacaccaccaacctgtcgctgagt
gccaccggtaccgtggcggaaggcggctcgatcgtttacaccgcaaccctgaccaacccg
gccggcaccccggtgaccgtgacgttgagcaacggctccgtcatcaccatcgaagccggc
aaaaccaccggcaccgtgaccgttccggcgcctgctgatgacgtctacaaagacgccggc
aaggttgaagtcacgatcaaagatgctgcaggcggcaacttcgagaacctggtgccaagc
acggttcctgccgttaccgaagtgactgacaccatcgacaccaccacggtgaaactgacc
gcgaccgaaaccgcagctgaaggtggcaccgtcacctacaccgccaccgtcggcgcacca
gtcaccggttcgccagttgtggttaccctggccaacggtcagagcatcaccatcgaagtg
ggcaagaccaccggtaccgtgaccaccaccgcaccgaacgatgcgctgacgggtcacgaa
ccactgaccaactcgatcaccggcgtaacgggcggcaactacgaaaacctcgtggccgac
aaaaccccggtcaacaccaccgtcaccgacactgtggacacgacaaatctgtcgctcagc
gccactaactcggtcgctgagggcggctcgatcacctacaccgcgaccctgaccaatgcg
gccggctcgccagtcaccgtgaccctgtccaacggttcggtcatcaccatcgaagccggc
aaaaccaccggtaccgtgaccgttccggcgccagccgatgacgtctacaaagacgccggc
aaggttgaagtgaccatcaaggacgcgtccggtggcaacttcgagaatctggtgccaagc
actgttccggcagtgactgaagtcaccgataccatcgatacctcgacggtcaaactgacc
gccaccgagtcggctgctgaaggtggcactgtcacctacaccgccaccgtcggcgctcca
gtcaccggctcgccagtcgtggtgaccctggccaatggtcagaacatcaccatcgaagtg
ggtaaaaccaccggcaccgtgaccaccatcgcgccaaacgacgcgttgaacggtcacgag
ccgctgaccaactcgatcaccggcgtgaccggtggcaattacgagaatctggtcgccgat
aaaaccccggtttcgaccacggtcactgacaccgtcgacaccaccaacctgtcgctgact
gcgaccggcaccgtggcggaaggcggctcgatcgtctacaccgcgaccctgaccaacccg
gccggtaccccggtgaccgtgaccctgagcaatggctcggtgatcaccatcgaagccgga
aaaaccactggcaccgtaaccgttccggcgcctgccgatgacgtctacaaagacgctggc
aaagtcgaagtgaccatcaaggatgcgtccggcggcaacttcgaaaacctcgttccgagc
cctgttccggcagtgaccgaagtcaccgacaccatcgatacttccaccgtcaaactgacg
gccgatacgtcggtcgcagagggtggcaccgtcacctacacagccaccgtcggcgcgcca
gtcaccggctcgcctgtggtcgtgaccctggccaacggtcagaccatcaccatcgacatc
ggcaagaccaccggcaccgtgaccaccactgcaccgaacgatgcgttgaccggtcacgaa
ccgctgaacaactcgatcaccaacgtcagcggcggcaactacgaaaacctcgttgccgac
aaaaccccggtcagcaccaccgtgaccgacaccgtcgacaccaccaacctgtcactgagc
gcgaccccggcggtgaacgaaggcggccagatcacctacaccgccaccctgaccaacgcc
gcgggtactccggtgaccgtgacgttgagcaacggcgccgtgatcaccatcgacgctggc
aagaccaccggcactgtgaccatcgatgcaccgaaagatgacgtctacaaggacgccggc
accgttgaagcgaccatcaagggcgcgaccggtggcgacttcgaaaacctggtgaccagc
aacaccccggccgtgaccaccgtcaacgacaccatcgacacctccaccgtgtcgctgacc
gccaccgccaacgtcgccgaaggcgaaaccgtggtctacaccgcgaccgtcaccgcgccg
gtaaccggtgcgccagtcgtggtcaccctgtccaacggccagaccatcaccatcgccgtc
ggtgaaaccaccggcagcgtgaatttcgttgcgccgaacagcccgctggcgggcggcagc
tcgctgagcgtcgccatcgacaaggttgccggcggcaactatgagaacctggtggccgac
aagacaccggcaaacacctcggtttcggacaccgtcgacaccaccaacctgaacctgacc
gccagcgactcggtggccgaaggtggttcgattgtttacaccgcaaccctgaccaacccg
gctggcactccggtgaccgtgaccctgtccaacggtgctgtcatcaccatcgaggccggt
aaaaccaccggtaccgtgaccgttcctgctccggcagacgacgtgtacaaagacgcgggc
aaagtcgaagcgaccatttcaactgccaccggtggcaacttcgagaacctggtgccgagc
accgttccagccgtcaccaacgtgaccgataccatcgacaccaccacggtc
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