Pseudomonas serboccidentalis: NN484_27030
Help
Entry
NN484_27030 CDS
T10180
Name
(GenBank) type I secretion system permease/ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
plis Pseudomonas serboccidentalis
Pathway
plis02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
plis00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NN484_27030
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
plis02000
]
NN484_27030
02044 Secretion system [BR:
plis02044
]
NN484_27030
Transporters [BR:
plis02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
NN484_27030
Secretion system [BR:
plis02044
]
Type I secretion system
Adhesin protein transporter
NN484_27030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_21
Peptidase_C39
MMR_HSR1
DUF87
AAA_29
RsgA_GTPase
Gtr1_RagA
Motif
Other DBs
NCBI-ProteinID:
WDR36098
LinkDB
All DBs
Position
5952662..5954818
Genome browser
AA seq
718 aa
AA seq
DB search
MESEVSRVQLIHDPRAMHDDPLLDGLLALCMLHQKPASAAMLTTGLPLPKQRLSVELLPR
AAARAGLQGRVLQRKLEEIPAIAMPALLLLKDGRSAVLLGWQGENEARVLLSESDGGESV
VSRELLADDYTGKVFFAQPQHKFDVNHGTLIPRARSWFRDTLKRSRWLYADAIAASFLIN
IIAMAAPLFVMNVYDRVVPNQAEATLWVLALGITGAYIFDLILKSLRSLCLDLAGKKTDL
IISATLFERIVGMAMKYRPARVGSFAQNIHEFQSLRDFLASLTLTSLIDLPFTILIFIVI
AILGGHLVWIPVLAFPIALLIGYALQKPLVATMERTMALGAERQSSLIETLAGLDAVKVN
NAESERQYQWEQTIGTLSRLELRVKMLSGLAMNITLLIQQLAGVIMIVFGVYQIIAGNLS
MGGLIACYMLSGRALSPLASLSGLLTRYQQARVTMTSVDQMMELPQERNFEERPLSRKVL
QGAIECRQLNFTYPEQQNPALKNINLVIRPGEKIGIIGRSGSGKSSLAKLLVGLYQPDDG
ALLVDGVDIRQIDVSELRYNIGYVPQDIQLLAGTLRDNLVSGARYVEDELVLQAAELAGV
HEFARLHPQGYELQVGERGQNLSGGQRQNVALARALLLNPPILLLDEPTSAMDNTGEERL
KQRLAAVVENKTVVLVTHRASLLSLVDRLLVVDRGQILADGPKAAVMEALKKGQISVA
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
gtggaatcagaagtcagtcgagttcaactcattcatgatccgcgcgcgatgcacgacgat
ccgttgctggatggtctgctcgctctgtgcatgttgcaccagaaacctgccagtgcggcg
atgctgaccaccggtctgccattgcccaagcaacgcctgagtgtcgagctgctgccccgc
gcggcggctcgcgccggcctgcagggtcgggtgctgcaacgcaagctggaagaaattcca
gcgattgccatgccggcgctgttgctgctcaaggatggccgcagtgccgtcctgctcggc
tggcaaggcgagaacgaagcccgggtgctgctcagcgaaagcgacggcggcgaatcggtg
gtcagccgtgaactgctggccgacgactacaccggcaaagtgttcttcgcccagccgcag
cacaaattcgacgtcaaccacggcacgctgatcccgcgtgcgcgctcatggtttcgcgac
accctcaagcgttcgcgctggctgtatgccgatgcgatcgccgccagtttcctgatcaac
atcatcgccatggccgcgccgctgttcgtgatgaacgtctacgaccgcgtagtgccgaac
caggccgaagcgaccctgtgggtgctggcgctgggcatcaccggcgcctacatcttcgac
ctgatcctcaagagcctgcgcagtctgtgcctggatctggccggcaagaaaaccgacctg
atcatctccgccacgctgttcgagcgcattgtcggcatggcgatgaaatatcgcccggca
cgggtcggcagctttgcgcagaacatccatgagtttcagagcctgcgcgacttcctcgcc
tcgctgaccctgaccagcctgatcgatctgccgttcaccatcctcatctttatcgtcatc
gccattctcggcgggcatctggtgtggattccggtgttggccttcccgattgccttgctg
atcggctacgcgttgcagaaaccgctggtggcgaccatggagcgcaccatggccctcggt
gccgagcgccagtcgagcctgatcgaaaccctcgccggcctcgacgcggtgaaggtcaac
aacgccgaaagcgaacgccagtatcagtgggaacagaccatcggcaccctcagccgcctc
gagctgcgagtgaaaatgctctccggtctggcgatgaacatcaccctgctgatccagcaa
ctggccggggtgatcatgatcgtcttcggtgtttaccagatcatcgccggcaacctgagc
atgggcggtctgattgcctgttacatgctcagtggccgtgcactcagcccgctggcgtcg
ctgtccggtctgttgacccgctaccagcaggcgcgagtgaccatgacctcggtcgaccag
atgatggagctgccgcaggagcgcaatttcgaagaacgtccgctgagccgcaaggtgctg
cagggcgcgatcgaatgccgtcagttgaatttcacctacccggaacaacagaacccggcg
ctgaagaacatcaacctggtgatccgtcccggcgagaagatcggcatcatcggtcgcagc
ggttcgggcaagagttcgctggcgaaactgctggtgggcctgtatcagccggacgacggt
gcgttgctggtggacggtgtggatatccgccagatcgacgtcagtgagctgcgctacaac
atcggctacgtgccgcaggacatccagctactggccggcaccctgcgtgacaacctggtc
tccggcgcacggtacgtcgaagacgagctggtgctgcaagccgccgaactggccggcgtc
cacgaattcgcccgcctgcacccgcaaggctacgagctgcaagtcggtgagcgtggacag
aacctctccggcgggcaacggcagaacgtcgcgctggcccgggcgctgctgctcaatccg
ccgatcctgctgctcgacgagccgaccagcgccatggacaacaccggcgaagaacgcctc
aagcaacgtctggccgctgtcgttgaaaacaagaccgtggtgctggtgacgcaccgggcc
tcgctgctgtcgctggtcgaccgcctgctggtggtcgaccgtggacagattctcgccgat
ggcccgaaagccgccgtgatggaagcgttgaagaaggggcagatcagtgttgcttaa
DBGET
integrated database retrieval system
