Polaribacter litorisediminis: K8354_00865
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Entry
K8354_00865 CDS
T07786
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
plit
Polaribacter litorisediminis
Pathway
plit03030
DNA replication
plit03430
Mismatch repair
plit03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K8354_00865 (dnaE)
03430 Mismatch repair
K8354_00865 (dnaE)
03440 Homologous recombination
K8354_00865 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plit03032
]
K8354_00865 (dnaE)
03400 DNA repair and recombination proteins [BR:
plit03400
]
K8354_00865 (dnaE)
Enzymes [BR:
plit01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K8354_00865 (dnaE)
DNA replication proteins [BR:
plit03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K8354_00865 (dnaE)
DNA repair and recombination proteins [BR:
plit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K8354_00865 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
Peripla_BP_4
Motif
Other DBs
NCBI-ProteinID:
UAM98411
LinkDB
All DBs
Position
complement(211627..214584)
Genome browser
AA seq
985 aa
AA seq
DB search
MYLNCHSYYSLRYGTFSEVALLQLAVENNVDGIALTDINNTSACMNFVQQAKKFNIKPIV
GIDFRNGNTQQFVAIAKNNDGFENINRYLSSFLTAKTKIPDQPKTLENTYIIYPFEKVLE
LNLTSFAENECIGISIAEINKLRFSYLKKYKDKLVIQQQVTIRNKKDFNAHRLLRAIDNN
TLLSKLPTTEECLATDSMHATEKLEESFKEFPHIIANTKKLLQNCTIYFGFNNERKNQNL
NLYCNSFEEDCKMLLQLCDDNMHKRYQNPTEKVKARLQKELKVIIDLKFVSFFLINYDII
RYAKENNFFHVGRGSGANSIVAYIIGITDVDPIELDLYFERFINPFRASPPDFDIDFSWK
DRNTVTQYIFNRFDNVALLATYNTFKYRAVVRELGKVFGLPKEEIDKLSKKVADTQLDDI
SKLVLKYGKLIEGFPNYVSVHSAGILILDKPIHYYSATHLPPKGFATVQFDMNIADDVGV
FKFDILGQRGLAKIKDALAIIKENNPTAPEIDITNVERFKNDKNINNLLKTGGAIGAYYV
ESPAMRGLMQKLQTQDYLGLVAASSIIRPGVSGSGMKEEFIKRHRFPEKRKEAHPILLQI
MPETYGVMVYQEDVMKVANQFADLTLGEADVLRRGMSGKYRSVEEFKAVEHKFITNCRKK
EYQDELIFEVWNQIKSFAGYAFAKGHSASYAVESYQSLFLKCYYPIEFMTAVLNNGGGFY
SAEHYIHEAKMCGAKIALPCINKSDHANTVEGKTIYLGFGYLKNLEDLVIQRILTERQIQ
GAFFSLDDFIDRVTISIEQLTILIRIDAFRFTLKPKTALLWQATFKLNATKIKHQTTQEK
LFRLQHQKFEIPALHTHWLENVYDEIALLGFTIHDYFSLVTEEFLPHTKAKEMEAYSNKN
ILLYGKLVTTRFNKTSQGKLMRLSTFIDQDGFYFDAVHFTDVVHLYPINGIGIYACYGKI
TNRFGFCSMNIIKSKKMSIAIDPRQ
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atgtatttaaattgtcatagctattattcattgcgttatggtaccttctctgaagttgcc
ttattgcaacttgctgtagaaaataatgtcgatggtattgcacttacagacatcaacaat
acctctgcttgtatgaattttgtgcagcaagctaaaaaatttaatataaaaccgattgtc
ggcattgattttagaaatggtaacacacagcaatttgtggctatcgcaaaaaataatgac
ggttttgaaaacatcaatcggtatttgtcttcttttttaaccgctaaaactaaaattccg
gatcaacccaaaacgttagaaaacacctatattatttatccttttgaaaaagtactggaa
ttaaatttaacttcttttgctgaaaacgaatgtatcggaatttcgattgcagaaattaat
aaactccgtttttcttatctaaaaaaatacaaagacaaattggtcattcagcaacaagtt
accatccgaaataagaaagattttaatgcacacagacttttacgagccattgataacaac
acattattaagcaaactacccactaccgaagaatgcttagccactgatagcatgcatgct
acagaaaaactagaagaatcgtttaaagaattcccccatatcatagccaacacaaaaaag
ctcttacaaaactgtacaatctacttcggatttaacaatgaacgtaaaaatcagaatctg
aatttgtattgcaatagttttgaggaagattgtaaaatgttgctacaattgtgtgatgat
aacatgcataaacgctaccaaaatcctacagaaaaagtaaaggcacgacttcaaaaagaa
ctaaaagtaattatcgatttgaaatttgtctccttctttttaatcaattatgatatcatc
cgctatgcgaaagaaaacaacttttttcatgtaggtagaggaagtggcgccaatagtatt
gtagcctatattataggcattaccgatgtagatcctattgaattagacttgtattttgaa
cgatttatcaatccgtttagagcttctccacccgattttgatattgatttttcttggaaa
gatagaaatacagtaacccaatatatttttaatcgttttgacaatgttgccttattagca
acctataatacttttaaatacagagccgttgtacgcgaattaggtaaagtatttggattg
ccaaaagaagaaattgataaactaagcaaaaaagttgccgatacacaattagacgacatc
tctaaactggttctaaaatacggaaaactcattgaagggtttccgaattatgtgagtgtt
cattctgccggtattttaattttagacaaacccattcattattattccgctactcattta
cctccaaaaggctttgctaccgttcagtttgatatgaatattgctgatgatgtaggtgtt
tttaaatttgatattttaggacaacggggtctggcaaaaattaaagatgcgttagcaatt
atcaaagaaaataatccgacagctcctgaaattgatattaccaatgtggagcgttttaag
aatgataaaaacattaacaacttgctaaaaacaggtggtgctattggtgcatattatgta
gagtcgcctgccatgcgtggcttaatgcaaaaattacaaacgcaagattatttgggtttg
gttgctgcaagttctattattaggccaggcgtgtcgggttctggaatgaaagaggagttt
ataaaacggcatcgttttcctgaaaaaagaaaagaagcacatcctattttattacaaatt
atgcccgaaacttacggcgtaatggtctatcaagaagatgtgatgaaagttgccaatcag
tttgccgatttaaccttgggagaagccgatgttttacgaagaggaatgagcggaaagtac
cgctctgtagaagaatttaaagccgttgaacataaatttattacaaattgtagaaaaaaa
gaataccaagacgaattaatttttgaagtgtggaatcaaattaaaagttttgcaggctac
gcgtttgcaaaaggacattctgcctcttacgcagtagaaagttaccagagtttattttta
aaatgctactaccctattgaatttatgaccgcagttttaaataatggtggtggcttttat
tcggctgaacattatattcatgaagctaaaatgtgtggtgcaaaaatagccttgccttgc
atcaacaaaagcgatcatgcaaataccgtagaaggaaaaactatttatttgggttttggt
tacctaaaaaatttagaagatttggtgattcaacgaattttaacagaacgtcaaatacaa
ggtgcttttttttctttggatgattttatcgatcgagtaaccatttcgatagagcaactc
accattttaattcgtattgatgcgttccgttttacactaaaaccaaaaacagcgctactt
tggcaagctacttttaaattgaatgccacaaaaataaaacatcaaacaacacaagaaaag
ctgtttcgcttgcaacatcaaaaatttgaaattccagcattacatacccattggttagaa
aatgtttatgatgaaatagcactgttagggtttactattcacgattatttttctttggtt
accgaagaatttcttccccatacaaaagcaaaagaaatggaagcctattctaataaaaat
atattgttgtatggtaaattagtcactactagatttaacaaaacttcacaaggaaaactc
atgcgtttaagcacttttatagaccaagatggtttttattttgatgcagttcattttaca
gatgttgttcatttatatccaataaacggaataggaatttatgcttgttacggtaaaatt
accaatcgttttgggttttgcagtatgaatatcatcaaatctaaaaagatgagtattgct
attgatcctaggcaataa
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