Polaribacter litorisediminis: K8354_01400
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Entry
K8354_01400 CDS
T07786
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
plit
Polaribacter litorisediminis
Pathway
plit03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
plit00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
K8354_01400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plit03021
]
K8354_01400
03400 DNA repair and recombination proteins [BR:
plit03400
]
K8354_01400
Enzymes [BR:
plit01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
K8354_01400
Transcription machinery [BR:
plit03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
K8354_01400
DNA repair and recombination proteins [BR:
plit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
K8354_01400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
UAM98513
LinkDB
All DBs
Position
330367..331359
Genome browser
AA seq
330 aa
AA seq
DB search
MAILNFQKPDKVIMIESTDFTGRFEFRPLEPGFGLTVGNALRRVLLSSLEGFAITSLRID
GVEHEFSTISGIVEDVTEIILNLKQVRFKKQIEETDRETVSVSISGQEQFTAGDLQKFIS
GFQVLNPDLVICNMEQSVKLNAEITIEKGRGFVPAEENKKSSAPIGTIFTDSIYTPIKNV
KYAIENFRVEQKTDYEKLVFDIDTDGSINPKDALTEAAKILIHHFMLFSDERITLEADEI
AQTETYDEESLHMRQLLKTRLIDMDLSVRALNCLKAAEVDTLGDLVSFNKSDLMKFRNFG
KKSLTELEELVIVKGLSFGMDLTKYKLDRD
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcaatattaaattttcaaaagcccgataaagtaataatgattgaatctacagatttt
actggtagatttgaattcagacctttagaaccaggttttggtttaactgttggtaatgcc
ttaagaagagtacttttgtcttctttagaaggttttgcaataacctctttaagaatagac
ggtgtagaacatgaattttctactattagtggtattgtagaggatgttacagaaataatt
ttaaacttaaagcaagttcgttttaagaagcaaatagaggaaacagacagggaaactgtc
tctgtttcaatttctggtcaagagcagtttactgcgggagatttacagaaatttatttca
ggttttcaagttttgaatcctgatttagttatttgtaacatggaacaatctgtaaaatta
aacgcagaaattactatagaaaaaggaagaggatttgttcctgctgaagagaataaaaaa
tcatcagcaccgataggaacgatctttacagattctatatacactccgattaaaaatgta
aaatatgcaatcgagaattttcgtgtagagcaaaaaacggattatgaaaaattagttttc
gatatcgatacggatggttcaattaatccaaaggatgcattaacagaagctgcaaaaatt
ttaatccatcactttatgttattctctgatgagcgtatcactttagaggcagatgaaatt
gcacagacagaaacatatgatgaagagtcattgcatatgcgtcaattattaaaaactaga
ttaatcgatatggatttatctgtaagagctttaaactgtttaaaggctgcagaagtggat
acattaggagatttagtttcttttaataaaagcgatttaatgaagtttagaaactttgga
aaaaaatctttaacagaattagaggagttggttattgttaaaggattaagttttggaatg
gacttaacaaaatacaaattagatagagattaa
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