KEGG   Polaribacter litorisediminis: K8354_01950
Entry
K8354_01950       CDS       T07786                                 
Name
(GenBank) ribonuclease Z
  KO
K00784  ribonuclease Z [EC:3.1.26.11]
Organism
plit  Polaribacter litorisediminis
Brite
KEGG Orthology (KO) [BR:plit00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:plit03016]
    K8354_01950
Enzymes [BR:plit01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.11  tRNase Z
     K8354_01950
Transfer RNA biogenesis [BR:plit03016]
 Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    K8354_01950
 Prokaryotic type
    K8354_01950
SSDB
Motif
Pfam: Lactamase_B_2 Lactamase_B_4 Lactamase_B Anti-Pycsar_Apyc1 Lactamase_B_6 PDEase_II
Other DBs
NCBI-ProteinID: UAM98619
LinkDB
Position
complement(454164..455081)
AA seq 305 aa
MSLKLTILGCHSATPRANAFPTSQYLEINNKHFLIDCGEGTQRQMRKYKVGFSKIDHIFI
SHLHGDHFYGLVGLLATYGILSREKELHIYGPKGIKEVTLLQLKVSQSHAKYPMIFHELT
SKKSELIFEDAKVSVQTIPLNHRVYTNGYLFTEKENSRKLHIQNISNYKEIGKADYLNIK
AGRDVMLSTGEVIPNDELTLPPKKPLSFAFCSDTFYKPAIIPIIKNVDLLYHEATFLADR
EDLAQKTKHSTSAQAAQIAKNAEVGQLIIGHFSGRYKDISLFQKEATAIFKNTQLAAPGK
VFKIE
NT seq 918 nt   +upstreamnt  +downstreamnt
atgagtttaaaacttactattttaggttgtcattctgcaacaccaagagcaaatgctttt
cctacttctcagtatttagaaataaataacaaacactttttaatagattgtggtgaaggt
acgcagcgccaaatgagaaaatataaagttggattttctaaaatagatcatatttttatt
tcacatttgcacggagaccatttttatggtttggttggtttattagcaacttatggtatt
ttaagtagagaaaaagaattgcacatttacggcccaaaaggcatcaaagaagtaacgctt
ttacaattaaaagtctctcaatctcatgcaaaatatcctatgatttttcatgaattaacg
tctaaaaaaagcgaacttatttttgaagacgctaaagtttctgtacaaacgattccttta
aatcatcgtgtatataccaacggatatttatttacagaaaaagaaaactcaagaaaactg
catattcaaaacatcagcaattataaagaaataggcaaagcagattatttaaatattaaa
gcaggcagagatgtaatgctatcaacaggagaagtaatacctaatgatgaattaacgcta
cctccaaaaaaacctttaagctttgctttttgcagcgacaccttttataaaccagccatt
atacctattattaaaaatgtagatttgttataccatgaagctacttttttagcggataga
gaagatttagcccaaaaaacaaaacattctacttctgcacaagcggctcaaattgctaaa
aatgctgaagtaggccaattaattattggtcatttctctggtaggtataaagatatttct
ttgtttcaaaaagaagcaacagcaatttttaaaaacactcaattagcagcaccaggaaaa
gtattcaaaatagaatag

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