KEGG   Polaribacter litorisediminis: K8354_02770
Entry
K8354_02770       CDS       T07786                                 
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
plit  Polaribacter litorisediminis
Brite
KEGG Orthology (KO) [BR:plit00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:plit03016]
    K8354_02770 (truA)
Enzymes [BR:plit01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     K8354_02770 (truA)
Transfer RNA biogenesis [BR:plit03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    K8354_02770 (truA)
 Prokaryotic type
    K8354_02770 (truA)
SSDB
Motif
Pfam: PseudoU_synth_1 RdRP_helical DUF2344
Other DBs
NCBI-ProteinID: UAM98765
LinkDB
Position
650309..651034
AA seq 241 aa
MRYFIELSYNGKNYHGWQIQPDVISVQEKLNNAVSTVLQEEIQVVGAGRTDTGVHASQMF
AHFDTTKELKEEILFRLNSILPNDISVAQVFLVDDDKHVRFDAISRSYEYKIWLGRNPFL
LDFSWQIHSQKPNIALMNDAAKLLLEYEDFQCFSKVKTDVYTFNCNITEAFWEQKENELT
FYISANRFLRNMVRAIVGTLKDVGLGKISKEDFRKIIESKNRSNAGLSVPAKGLFLTQIK
Y
NT seq 726 nt   +upstreamnt  +downstreamnt
ttgagatattttatagaactttcatacaatgggaaaaattatcatggttggcaaattcaa
ccagatgttatttctgtgcaagaaaaattaaataatgcggtaagtacagttcttcaagaa
gaaattcaggttgtgggagcaggaagaacggatacgggtgtgcatgcatcgcaaatgttt
gcccattttgataccacaaaagagttgaaagaagagattctttttaggctaaattcaatt
ttacccaatgatatttctgttgctcaagtttttttagtagatgacgacaaacatgttcgt
tttgatgccatttcgaggagttatgaatataaaatttggttgggtagaaatccgtttttg
ttagatttttcatggcaaatacattcgcaaaaacccaatatagctttgatgaacgatgca
gcaaaactattattagaatacgaagattttcagtgtttttctaaagtaaaaacagatgtc
tatacttttaattgcaatattacggaagcgttttgggaacaaaaagaaaatgagttaacc
ttctatatttctgcaaatcgttttttaagaaacatggtaagagcaatcgttggtacttta
aaagatgttggtttgggaaaaatatcaaaagaagattttagaaaaattatagagagcaaa
aataggagcaatgcaggattgtcagttccggcaaaaggcttatttttaacacaaattaaa
tattaa

DBGET integrated database retrieval system