Polaribacter litorisediminis: K8354_03810
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Entry
K8354_03810 CDS
T07786
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
plit
Polaribacter litorisediminis
Pathway
plit03030
DNA replication
plit03430
Mismatch repair
plit03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K8354_03810 (holA)
03430 Mismatch repair
K8354_03810 (holA)
03440 Homologous recombination
K8354_03810 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plit03032
]
K8354_03810 (holA)
03400 DNA repair and recombination proteins [BR:
plit03400
]
K8354_03810 (holA)
Enzymes [BR:
plit01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K8354_03810 (holA)
DNA replication proteins [BR:
plit03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K8354_03810 (holA)
DNA repair and recombination proteins [BR:
plit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K8354_03810 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
DNA_pol3_delta2
Motif
Other DBs
NCBI-ProteinID:
UAM98956
LinkDB
All DBs
Position
879878..880879
Genome browser
AA seq
333 aa
AA seq
DB search
MNEIRTILSDIKKGNIKPIYFLMGEEPYYIDIISDYIEKNVLEESEKGFNQQVMYGRDTE
IEDIISTAKRYPMMAERQVLIIKEAQDLSRHIDKLVGYAENPQPTTVLVLNYKYKKLDKR
KKLHKAIAKSGLVYESKKLYDNQVGDWILRVLSVKKYKIEPKASQMLVEFLGTDLSKIAN
ELEKLMLILPKGSIISDKDIEDNIGISKDFNNFELKKAVGEKNILKVNRIINYFAENPKK
NPLVMTISLLNNYFTQLLLLHGLKDKSKSSVAKNLGVNPYFVDEYFSAAKNYPMRKVAQV
IAFLRDADVKSKGVGASQSHRDLLKELLFKILH
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaataagaaccattctttcagatattaaaaaaggaaatataaaacccatttat
tttttaatgggtgaggagccttattatattgatattatttctgattatattgagaaaaat
gttttagaagaatcagaaaagggtttcaaccaacaggtgatgtatggtagagataccgaa
attgaagatattatatctactgctaaacggtacccaatgatggcagaaaggcaggtttta
attattaaagaagcacaagatttaagcaggcatatagacaaattagtggggtatgcagaa
aatccgcagccaactacggttttagtattgaactacaaatacaagaaattagacaagcgt
aaaaaattacataaggcaattgctaaatctggtttggtctatgaaagtaaaaaattatat
gataatcaggttggagattggattctccgtgttttaagcgttaaaaaatataaaattgag
ccaaaagcttctcaaatgttagtagaatttttaggcacagatttaagtaaaatagcgaat
gaattagagaaattaatgttgattctgcccaaaggaagcatcattagtgataaagatatt
gaggataatatcggcatttctaaggattttaataatttcgaacttaaaaaagcagtaggc
gaaaagaacattttaaaggtaaatagaattatcaattactttgcagaaaaccctaaaaag
aatcccttagtaatgacgatttctttgttgaataattattttacccagttgttattactg
catggattaaaggataaatctaaaagttcagtcgccaaaaacttgggtgtaaatccttat
tttgttgatgaatacttttcggcagcaaaaaattacccgatgcgaaaagtagcacaagta
atcgcctttctaagagatgcagatgtaaagagtaagggggttggagcaagccaatctcac
cgagatcttttgaaggagttactgtttaaaatattgcattaa
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