Polaribacter litorisediminis: K8354_06495
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Entry
K8354_06495 CDS
T07786
Name
(GenBank) DEAD/DEAH box helicase
Organism
plit
Polaribacter litorisediminis
Pathway
plit03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plit00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K8354_06495
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GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
NAT10_TcmA_helicase
NACHT
Motif
Other DBs
NCBI-ProteinID:
UAM99454
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Position
complement(1514956..1516296)
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AA seq
446 aa
AA seq
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MSKTFSDLGIHQQLQQSLTALKISVPTDIQKKVIPVLLHQKEDVVALAKTGTGKTAAFGL
PLLQLMDTKKDNIQAVILAPTRELGQQIHANLKAFASNTPEISMAVICGGIPIKPQIERL
KETTHIVVATPGRLADLVSRKAINIKNISYFILDEADEMVSALKEGLDSIIREIPKKRRT
LLFTATMPGSIRQLVNNYMSKEVVQIEADMKTLGHQGIEHQYVIVEPIEKLEVLLHFLNA
KEGQRGIIFCKTKAAVNKLAKNLAIHKFSSGAIHGSLTQGIRDRIMGQFREGHIDILVAT
DLAARGIDVKEISYVVNYHLPDTYDAYVHRSGRTARAGAKGLSLTILQKEEAADIADFQN
ELGITFNAYQKADAQSIEENNGLLWAKKIFKTKPNKTVSEDFKRKVRTVFHHLTKEELIE
KVLADYLNQTNSKISKTEDSKKTKRK
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagaccttttctgatttaggaattcatcaacaattacaacaaagtttaacggct
ttaaaaatctctgtacccacagatattcaaaaaaaggtgattcctgtactattgcatcaa
aaagaagatgtagttgccttggcaaaaacaggaaccggaaaaactgcggcttttggtttg
ccattactccaattaatggatacaaaaaaggacaatattcaagctgtaattttagcacca
acaagagaattaggacaacaaattcatgcaaatttaaaagcatttgcttcaaatactcca
gaaatatccatggcagttatttgtgggggaattccgattaaacctcaaattgaaagatta
aaagaaaccacacatattgtggttgcaacgcccggacgtttagctgatttagtgagccgt
aaagccatcaacataaaaaatatttcttattttattttagatgaagccgatgaaatggtt
agcgctttaaaagaaggattggatagtattattagagaaattcccaaaaaaagaagaact
ttattgtttacagcaacgatgcccggatcgattagacagctcgtaaataattatatgtct
aaggaggttgttcaaattgaagccgatatgaaaaccttaggacatcaaggaattgagcac
caatacgtaattgtagaaccaatagaaaaactagaggttttattgcactttttaaacgct
aaagaagggcaaagaggtattattttttgtaaaacgaaagccgctgttaataaattagct
aagaatttagccattcataaattctcttctggagcgattcatggaagtttaacgcaagga
attcgagatcgaattatgggacaatttcgagaaggtcatatcgatattttagtagctaca
gatttagccgctagaggaattgatgtaaaagaaatttcctacgtggtgaattatcattta
ccagacacttatgatgcctatgtgcatagaagcggacgaacggcaagagcaggagcaaag
ggactttcgttaaccattttacagaaagaagaagcagcagatattgctgattttcagaat
gaattaggcattacttttaatgcctatcaaaaagcagatgcccaaagtatagaagaaaat
aacggtctcttatgggcaaaaaaaatatttaaaaccaaacctaacaaaacagtttctgaa
gattttaaaagaaaggttagaacggtttttcatcatttaacaaaagaagaattgattgaa
aaagtattggcagattatttaaatcaaacaaattcaaaaatttctaaaacggaagattct
aaaaaaacaaagagaaaataa
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