Polaribacter litorisediminis: K8354_06560
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Entry
K8354_06560 CDS
T07786
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
plit
Polaribacter litorisediminis
Pathway
plit03420
Nucleotide excision repair
plit03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
plit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K8354_06560
03430 Mismatch repair
K8354_06560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plit03400
]
K8354_06560
Enzymes [BR:
plit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K8354_06560
DNA repair and recombination proteins [BR:
plit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K8354_06560
MMR (mismatch excision repair)
Other MMR factors
K8354_06560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
ResIII
AAA_11
Motif
Other DBs
NCBI-ProteinID:
UAM99465
LinkDB
All DBs
Position
complement(1531187..1533508)
Genome browser
AA seq
773 aa
AA seq
DB search
MNTYLNSLNEAQKQAVLQKDGPMIIIAGAGSGKTRVLTYRIAHLMQSGVDAFNILSLTFT
NKAAKEMKARIAGVVGQSEAKNLWMGTFHSVFARILRSEADKLGFPSNFTIYDTQDSVRL
ISAIIKEMGLDKERYKPKQILGRISSFKNSLITVRAYFNNSDLQEADLHASRPKVGDIYK
EYVDRCFKSGAMDFDDLLLRTNELLARFPESLAKYQDRFRYIMVDEYQDTNHSQYIIVRA
LADKFGNICVVGDDSQSIYSFRGANIQNILNFQKDYPEVKTFKLEQNYRSTKNIVNAANS
VIAKNKTKLDKEVWTSNDAGDSINVMRTISDGEEGRFVAQSIWENQMNHQLTPDDFCVLY
RTNSQSRAIEDALRKKGIDYKIYGGISFYQRKEIKDILSYLRILINPNDEEALKRIINYP
ARGIGATTIDKLTIAANHYKKSIFDILKYIDKIDLKINSGTKNKLQNFMNMILRLQIESQ
TKNAFEIAEIVVKQTQLIKDLEKDGTPEAVSKVENVQELLNGIKDFITDKIEQGEDTSLT
SFLEDVALATDFDSKKDDDKPSVSLMTIHQSKGLEYMYVYIVGLEENLFPSAMSMNTRSE
LEEERRLFYVALTRAEKVAYLSYAQTRYRWGKLIDAEPSRFLEEIDDQYLYYITPKMPEP
SVNKFIDKSIFEDAPKGIRFQKPIQRKKMERDLVKKKEITVPKNLKKASETVSKSNLFDN
KIVVGNIIEHDRFGRGEVLSLEGKGPDKKAMIKFGTAGKKNLLLRFVKLKIIG
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
ttgaatacatacttaaattctttaaacgaagcacaaaaacaagcggtcttgcaaaaagac
ggacccatgattataattgcaggtgcaggttctggtaaaacaagagttctaacctataga
attgcacatttaatgcaatctggcgtggatgcttttaatattttatcgctcacatttacc
aacaaagctgccaaagaaatgaaagcaagaattgctggagttgttggtcaaagtgaagca
aaaaatctttggatgggaacttttcattcggtttttgcaagaattttacgttcggaagcg
gataaattgggttttccatcaaactttaccatttacgatacgcaagattccgttcggtta
atcagtgctattattaaagaaatgggcttagacaaagagcgctataaacccaaacaaata
ttaggacgaatttcatcctttaaaaatagtttaattactgtaagagcctactttaataat
agtgatttacaagaagcagatttgcatgctagcagacctaaagtcggagatatttataaa
gaatatgtagaccgatgttttaaatctggtgctatggattttgatgatttattgttgaga
actaatgaattattagctcgttttccagaatctttggcaaaatatcaagatcgttttcgg
tacatcatggtagatgagtaccaagatacaaaccattctcaatatataattgtaagagct
ttggcagataagtttggtaatatttgtgttgttggtgatgattctcaaagtatttatagt
tttagaggggcaaatattcagaatattttaaattttcaaaaggattatccagaggtaaaa
acctttaagcttgaacaaaattatcgttctacaaaaaatattgtgaatgctgcaaattct
gtaattgccaaaaacaaaacaaaattagataaagaagtttggacttctaacgatgctgga
gattcgattaacgtaatgcgaactatttctgatggagaagaaggtcgttttgttgcacaa
tctatttgggaaaaccaaatgaatcatcaattaacacccgatgatttttgcgttttgtat
agaacaaactcccaatcgagagccattgaagacgccttaagaaaaaaaggaattgattat
aaaatttatggtggaatttctttttatcaaagaaaggaaatcaaagatattttgtcttat
ttgcgaattctaatcaacccaaatgatgaagaagcgttaaaaagaatcatcaattatcct
gcaagaggaattggtgcaactactattgataaattaaccatagctgcaaatcattataaa
aaatcaatttttgatattttaaaatatattgacaaaatcgatttaaaaataaattctgga
actaaaaataaacttcagaattttatgaacatgattttgcgtttgcaaatagaatctcaa
acaaaaaatgcgtttgaaattgcagaaattgtagtgaaacaaacacaattaattaaagat
ctagaaaaagacggaactccagaagctgttagtaaagtagaaaatgttcaagaactttta
aacggaattaaagattttattacagataaaatagaacaaggagaagatacctcattaact
tcgtttttagaagatgttgctttggctacagatttcgactctaaaaaagatgatgacaaa
cccagtgtttcgctcatgacaattcatcaatctaaaggattagaatatatgtatgtatat
attgtgggtctagaagaaaatttattcccatctgccatgagcatgaatactcgaagtgaa
ttagaagaggagcgtaggttattttatgtggcgttaacacgtgcagaaaaagttgcgtat
ttaagttatgcacaaacaaggtatcgttggggtaaattaattgatgctgaacctagtagg
tttttagaagaaattgatgaccaatatttgtattatattactccaaaaatgccagaaccc
tctgtaaataagtttattgacaaaagtatttttgaagatgcacctaaaggaattcgtttt
caaaaacctattcagcgcaaaaaaatggagcgcgatttggttaaaaagaaagaaatcaca
gttcctaaaaatttaaaaaaggcatcagaaactgtctctaaatcaaatttatttgataat
aaaattgtggttggtaatattatagaacacgatcgttttggtaggggagaagtcctttct
ttagaagggaaagggcccgataaaaaagcaatgattaaatttggcaccgcgggaaagaag
aatcttctattgcgttttgtgaaattgaaaattattggttaa
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