Polaribacter litorisediminis: K8354_07040
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Entry
K8354_07040 CDS
T07786
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
plit
Polaribacter litorisediminis
Pathway
plit03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
plit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K8354_07040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plit03400
]
K8354_07040
Enzymes [BR:
plit01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
K8354_07040
DNA repair and recombination proteins [BR:
plit03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
K8354_07040
Prokaryotic type
K8354_07040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UAM99553
LinkDB
All DBs
Position
complement(1644887..1645552)
Genome browser
AA seq
221 aa
AA seq
DB search
MQVKIADSWKNILQLEFEKPYFGELTSFVKLEYQNNSCYPKESNIFAAFDFCSLEDLKVV
IIGQDPYHGENQANGLCFSVKDGITHPPSLKNIFKEISTDLGKEYPQSGNLEKWAKQGVL
LLNATLTVRAHEAGSHQKQGWETLTDSVIKQISDEKENLVFLLWGGFAKKKLKLIDTNKH
HILVSGHPSPLSANRGYWFGNEHFSKTNLFLKSKNKNEIDW
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtaaaaatagctgatagttggaaaaatattttgcaattagaatttgagaaacct
tattttggagaactcactagttttgtgaaattagagtatcaaaataattcatgttaccct
aaagaatctaatatttttgctgcatttgacttttgttccttagaagatttaaaagtagtt
attattggtcaagatccatatcatggggaaaaccaagcaaatggattgtgcttttcagta
aaagatggcatcacgcatccgccttctttaaaaaatatttttaaagaaatttctacggat
ttagggaaggaatatccacaaagtggaaatcttgaaaaatgggcgaaacaaggtgtttta
ttgttgaatgctactttaaccgtaagggcacacgaagctggtagtcatcaaaaacaagga
tgggaaactttaacagactcggtgatcaaacaaatttctgatgaaaaggaaaatttggtt
tttcttctttggggcggatttgcaaagaaaaaattaaaactaattgatacaaataaacat
catattttagtatccggacatccatcgcctttaagtgctaatagagggtattggtttgga
aatgagcatttttcgaaaactaatttatttttaaaatctaaaaataaaaatgaaattgat
tggtag
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