Polaribacter litorisediminis: K8354_07045
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Entry
K8354_07045 CDS
T07786
Name
(GenBank) DNA mismatch repair protein MutS
KO
K07456
DNA mismatch repair protein MutS2
Organism
plit
Polaribacter litorisediminis
Pathway
plit03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
plit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
K8354_07045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plit03400
]
K8354_07045
DNA repair and recombination proteins [BR:
plit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
K8354_07045
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
AAA_21
MSSS
AAA_22
DUF728
Motif
Other DBs
NCBI-ProteinID:
UAM99554
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Position
1645590..1647797
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AA seq
735 aa
AA seq
DB search
MNKNISEKTLQDLEFSTVLQHMSEFCISGLGKEKVFEIKPIQNKKELFKELDLVNEYLSS
FQSENRIPNHGFDNIINSVKRLAIENSFIETDAFLKIATTSLTVNELIKFFKKLQVQFPT
FFALSQKIEFITYVDDEIKKIIDISGEVKNNASSALKQIRRDINNIRGKIGASFSSALSK
AISAGYLDDIKETVVDNQRVLAVSAMHRRKISGSLLGSSKSGNIVYIAPQATLAYSREYQ
NLIYEEKQEVVKILRDLATTIRPLVPLLEDYIEFLIHMDTIGAKAKYAKEINAVLPKISR
EKRIFFKNAYHPILWRKNFTQKIHTVAQSIELNEKQQIIVISGPNAGGKSITLKTIGLLQ
IMLQSGILIPVDERSETYIFDTILTDIGDNQSIENQLSTYSYRLKNMRYFLRTCNENTLF
LIDEFGTGSDPELGGALAEIFLEEFYYKKAFGIITTHYSNLKVLANELENVTNANMQFDE
RTLEPLYRLFVGQAGSSFTFEVAQKNGIPYSIINKAKKRVETEKVRLDKTISKLQKERNT
LQKRSDNLEKQQVQGQEHLDNLQEKEQRIQDKLSGFQELYDKNQKMLSLGRKTNELLNKY
FQTNNKKELNSNFNKWVSDEKVKHLKKNPDAPKTKSQKQKAKIVEKQIEAVIQKVEKEVL
EKVIEVRKEKKIEAAKVAKEKSLYIYKVNDKVRIKDSNSVGTIDKIDRKSVTINYGFFTT
KTSVEKLELVQQAKK
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
ttgaacaaaaacatatcagaaaaaacattacaagatttagagttttcaacggttttacag
catatgtcagaattctgtatttctggtttagggaaagaaaaggtttttgaaattaaaccc
attcaaaacaaaaaagagctctttaaggaacttgatttagtcaatgaatatctgtcttct
tttcaaagtgaaaacagaattcctaatcatggttttgataatattataaatagcgtaaag
cgtttagctattgaaaatagttttatagaaacagatgctttcttaaaaattgctacaact
tcactaacggttaatgaacttattaaattttttaaaaagttacaggttcagttcccaacg
ttctttgcgctctctcaaaaaattgagttcatcacgtatgtagatgatgaaattaagaaa
atcattgatatttctggcgaagtaaaaaataatgcctcatcggctttaaaacaaattaga
cgagatattaataatattcggggtaaaattggtgctagtttttcaagtgcattatcaaaa
gctatctctgctggatatttagacgatattaaagaaactgtggtagataatcagcgagtt
ttggcggtttcagctatgcatagaagaaaaatttctggtagcttgttaggttcttcaaaa
tctggaaatatcgtatacattgcgcctcaagcaacccttgcttacagtagagaatatcaa
aatttaatctatgaagaaaagcaagaagttgtaaaaatattaagagatttagctacaaca
atacgtcctttagttcctttattagaagactatattgaatttttaattcatatggatacc
attggagcaaaagcaaaatatgcgaaagaaataaatgctgttttgccaaaaatatccaga
gaaaaaagaatattttttaagaatgcctatcaccctattttatggcgaaaaaattttact
cagaaaatacatacagttgctcaaagtattgaactgaatgaaaaacaacaaattattgta
atttctggtcccaatgcaggtggaaaaagtatcacgctaaaaacaattggtttactacaa
atcatgttacaaagtggtattttaattcctgttgatgaacgcagtgaaacctatattttt
gacactattctaacggatattggagataatcaatctattgaaaatcaattaagtacttat
agttatcgcttaaaaaatatgcgttattttttacggacttgtaatgaaaatactttgttc
ttaattgatgagtttggtacaggttcagatccggagttagggggcgctttggcagaaata
ttcttggaagaattttattataagaaggctttcggaattattactacccactactctaat
ttaaaagtactcgcaaacgaattagagaatgtaaccaatgcaaatatgcaatttgatgaa
cgtactttagagccgctgtatcgcttatttgttggtcaggctggtagttcttttaccttt
gaagtggcacaaaaaaacggaattccttacagcattatcaacaaagcaaaaaagcgtgta
gaaactgaaaaagttcgattagacaaaactatttccaagcttcaaaaagaaagaaatacg
ctccaaaaaagatctgataatttagaaaaacagcaagttcaaggtcaagaacatttagat
aatttgcaagaaaaagagcaacgtattcaagataaattatctggctttcaagagttatat
gataagaatcaaaaaatgctttctctaggaagaaaaacaaatgaattattgaataaatac
tttcaaaccaataacaagaaagagctaaacagtaattttaataaatgggttagcgatgaa
aaagtaaaacatctaaaaaagaacccagatgccccaaaaacaaaatcacaaaaacaaaaa
gcaaaaattgttgaaaaacaaatagaagccgtaattcaaaaagttgaaaaagaggtttta
gaaaaagttatcgaagttagaaaagagaaaaaaatagaagcggcaaaagttgctaaagaa
aaatctttatacatttataaagtgaatgataaagtgcgcatcaaagattctaattctgta
ggaaccattgataagattgatagaaaaagtgtgaccatcaattacggatttttcacaacc
aaaacatctgttgaaaaattagaattggtgcaacaagcaaaaaagtaa
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