Polaribacter litorisediminis: K8354_09290
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Entry
K8354_09290 CDS
T07786
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
plit
Polaribacter litorisediminis
Brite
KEGG Orthology (KO) [BR:
plit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plit03400
]
K8354_09290
Enzymes [BR:
plit01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
K8354_09290
DNA repair and recombination proteins [BR:
plit03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
K8354_09290
Prokaryotic type
K8354_09290
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
DUF2625
Motif
Other DBs
NCBI-ProteinID:
UAM99972
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Position
2159839..2161326
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AA seq
495 aa
AA seq
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MNINEEINIIWLKRDLRLQDNEAIFNALKTNKRTLFLYVFEKSLLADPHYSERHWNFIKQ
SIKDLNEDLIEFNTKVLCVTSEVVTTCNQLLNYYKIDTVFSHQETGLLITYTRDKDFTRY
CRNNSINWIENNNNGVLRGLLNRNDWFDKWDEYMYQTPFEYRLESQNFLSIDEIKKLERA
FFVTDLETTKDKIFQKGGTKMAWKYANSFFETRHQNYMFHISKPALSRESSSRLSPYIAW
GNISIRQVFQKALAYKNDSNKRHLGAFISRLRWQAHFIQKFEMEHTMEEASVNKGYHKLK
KSVSKKYQIAWKEGQTGFPLVDASMRCLNETGYLNFRMRSMLVSFFTHILWQPWQDATHH
LSQNFLDFEPGIHFPQMQMQAAETGINNIRIYNPTKNSIEHDADATFIKKWVPELAQLST
PFIHEPYLMTPLDQQFSNFELGTDYPKPIVDIKLTRKKASDILYKMRQDPEVLLENKRIL
NKHTISDRNKMLRNE
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgaatattaacgaagaaataaatataatttggttaaaacgagatctacgtttacaagat
aatgaggcgatttttaatgccttaaaaacaaacaaacgcaccttatttttatatgttttt
gagaaatctttacttgccgatcctcattattcagagcgtcattggaactttataaaacaa
tctatcaaagatttaaatgaagatttaatagagtttaacacaaaagtattgtgtgtaaca
tcagaagtggtaacaacgtgtaatcaactcttgaactattataaaattgatacggttttt
tcgcatcaagaaacaggattattaattacatacacccgagataaagattttacaagatat
tgtagaaacaattcaataaattggatagaaaacaataataacggagtgctaagaggttta
ttaaatagaaatgattggtttgataaatgggatgaatacatgtatcaaactccttttgaa
tatcgattagaaagccaaaactttttgtctattgatgaaattaaaaaactagaaagagcc
ttttttgtaacggatttagaaacaactaaagataagatttttcaaaaaggaggaactaaa
atggcatggaaatatgccaatagtttttttgaaacacggcatcaaaattatatgtttcac
atttctaaaccagcgctgtctcgagaaagttctagtagattatcgccttatatagcctgg
ggaaacatttctattcgtcaagtttttcaaaaagcattggcctataaaaatgattcaaat
aaaagacatttaggtgcttttatttcgagattgcgctggcaagcccattttattcaaaag
tttgaaatggagcacaccatggaagaagcaagcgtaaataaaggttaccataagctaaaa
aaaagtgtttctaaaaaatatcaaatagcttggaaagaagggcaaaccggtttcccttta
gtagatgcgagtatgcgctgtttaaatgaaacaggctacttaaactttagaatgcgttcg
atgttagtttccttttttactcatattttatggcaaccttggcaagatgctacccatcat
ttatcacaaaattttttagattttgaacctggtattcattttccgcaaatgcaaatgcaa
gcagccgaaacgggtattaataacatcagaatttacaatcctacaaaaaacagtattgag
catgatgccgatgctacttttatcaaaaaatgggttcctgaattggcacaactttctaca
ccattcattcatgaaccctatttaatgactccgctagatcagcagtttagcaattttgaa
ttaggtacagattacccaaagcctattgtagatattaagttaacgcgaaagaaagcaagc
gatattctctacaaaatgagacaagatcctgaggtgcttttagaaaataaaagaatctta
aacaagcatacaatttctgacaggaataaaatgttaagaaacgaatag
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