Polaribacter litorisediminis: K8354_09340
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Entry
K8354_09340 CDS
T07786
Name
(GenBank) DNA photolyase family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
plit
Polaribacter litorisediminis
Brite
KEGG Orthology (KO) [BR:
plit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plit03400
]
K8354_09340
Enzymes [BR:
plit01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
K8354_09340
DNA repair and recombination proteins [BR:
plit03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
K8354_09340
Prokaryotic type
K8354_09340
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
UAM99982
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Position
2165144..2166445
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AA seq
433 aa
AA seq
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MKITINIFWFRRDLRLHDNCGLYHALTSDKNVLPIFIFDEDILNKLPKDDARVTFLHQEL
ENIHKQLLHINSGISIFHGKPLNIFNELSKKYHIETVFTNHDYEPYAIQRDLEIKEFLTS
KKIIFKTYKDQVIFERNEIVKKDGTAYKVYTPFSKKWIEAFQFKGIQFYPSEDNLENFIK
NEPHPILTLEEIGFTESSIKVASYTVSPKLINAYEETRNFPAKDATSKLGTHLRFGTVSV
REMVDKASKSNNITFLKELIWREFFMQILWHFPYTTKNSFKPQYDRIIWRNNEQEFKAWC
QGKTGYPLVDAGMRELNQTGFMHNRVRMLVGSFLCKHLLIDWRWGEAYFAEKLHDYEQSS
NVGNWQWVAGTGVDASPYFRIFNPTTQIQKFDKSLEYIKKWVPEFQEFTYCKEIVDHKFA
RERCLKVYKEAVK
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattactataaatattttttggtttagacgagatctgcgcttacatgataattgt
ggtttatatcatgcattaacttcagataaaaatgtacttcctatttttatttttgatgaa
gacattctaaacaaacttccaaaagatgatgctagagttacttttctgcatcaagaatta
gaaaacatacacaaacaacttttacacatcaatagtggcatctcaatttttcatggaaag
cccctgaacatttttaatgaattatcaaaaaaataccacatagaaactgttttcacaaat
catgattacgaaccctatgccattcaaagagatctggaaattaaagaatttttaacctca
aaaaaaataattttcaaaacctataaagatcaggtaatttttgaaagaaatgaaattgta
aaaaaagatggaactgcctataaagtatatactccgttttcaaaaaaatggatagaagcg
tttcaatttaaaggaattcaattttatccttcggaagataatttagagaattttattaaa
aatgagcctcatcctattttaactttagaagaaattggttttacggaatcttcgataaag
gtagcatcttacaccgtttctccgaaactgattaatgcatacgaagaaaccagaaatttc
ccagcaaaagatgctacatcaaaattaggtacgcatttaagatttgggaccgttagtgtt
cgagaaatggtagataaagcttcgaaaagcaacaatatcacttttttaaaagaacttatt
tggcgtgaatttttcatgcaaattttatggcattttccgtataccacaaaaaacagtttt
aaacctcaatatgatagaattatatggagaaataatgaacaagagtttaaagcttggtgc
caaggaaaaacaggatatcctttagtagatgcgggtatgagagaattaaaccaaactggt
tttatgcacaatagggttagaatgttggtaggtagttttctttgcaaacaccttttaatt
gactggagatggggagaagcttattttgcagaaaaattacacgattatgagcaatctagt
aacgttggtaattggcaatgggtggcaggcacaggtgtggatgcatctccttattttaga
atttttaatcctactacacaaattcaaaagtttgataaaagtttagaatacattaaaaaa
tgggttccagaatttcaagaattcacttattgtaaggaaattgttgatcataaatttgct
cgagaacgctgtttaaaagtatacaaagaggctgtgaaataa
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