KEGG   Polaribacter litorisediminis: K8354_10355
Entry
K8354_10355       CDS       T07786                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
plit  Polaribacter litorisediminis
Pathway
plit00010  Glycolysis / Gluconeogenesis
plit00020  Citrate cycle (TCA cycle)
plit00260  Glycine, serine and threonine metabolism
plit00280  Valine, leucine and isoleucine degradation
plit00310  Lysine degradation
plit00380  Tryptophan metabolism
plit00620  Pyruvate metabolism
plit00630  Glyoxylate and dicarboxylate metabolism
plit00640  Propanoate metabolism
plit00670  One carbon pool by folate
plit00785  Lipoic acid metabolism
plit01100  Metabolic pathways
plit01110  Biosynthesis of secondary metabolites
plit01120  Microbial metabolism in diverse environments
plit01200  Carbon metabolism
plit01210  2-Oxocarboxylic acid metabolism
plit01240  Biosynthesis of cofactors
Module
plit_M00009  Citrate cycle (TCA cycle, Krebs cycle)
plit_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
plit_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
plit_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:plit00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    K8354_10355 (lpdA)
   00020 Citrate cycle (TCA cycle)
    K8354_10355 (lpdA)
   00620 Pyruvate metabolism
    K8354_10355 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    K8354_10355 (lpdA)
   00640 Propanoate metabolism
    K8354_10355 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    K8354_10355 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    K8354_10355 (lpdA)
   00310 Lysine degradation
    K8354_10355 (lpdA)
   00380 Tryptophan metabolism
    K8354_10355 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    K8354_10355 (lpdA)
   00670 One carbon pool by folate
    K8354_10355 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:plit04147]
    K8354_10355 (lpdA)
Enzymes [BR:plit01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     K8354_10355 (lpdA)
Exosome [BR:plit04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   K8354_10355 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 DAO HI0933_like FAD_oxidored NAD_binding_8 FAD_binding_3 GIDA Lys_Orn_oxgnase Thi4 3HCDH_N 2-Hacid_dh_C XdhC_C
Other DBs
NCBI-ProteinID: UAM96733
LinkDB
Position
2418297..2419685
AA seq 462 aa
MKYDIIIIGSGPGGYVTGIRASQLGFKVAIVEKESLGGICLNWGCIPTKALLKSAQVYDY
LKHVDQYGLKAESIDKDFDAVIKRSRGVAEGMSKGVAFLMKKNKIDIINGFGKIKTGKKV
DVTAEDGTVTEYSADNIIIATGSRSRELPNLPQDGVKVIEYRKAMTLPSQPKSMIVVGSG
AIGVEFAHFYNTMGTEVTIVEYMPNLVPVEDIDISKQFERSIKKAGIKVMTNSSVESVDT
SGEGVVATVKTKKGDIKLEADILLSAVGIKSNIENIGLEDVGIIVDRDKILVNDFYQTNI
PGYYAIGDVVPGQALAHVASAEGITCVEKLAGLHTEPIDYGNVPGCTYATPEIASVGLTE
AKAKEAGYELKIGKFPFSASGKAKAAGTPDGFVKVIFDAKYGEWLGCHMIGAGVTDMIAE
AVLGRKLETTGHEVLKTIHPHPTMSEAVMEAVADAYDEVIHL
NT seq 1389 nt   +upstreamnt  +downstreamnt
atgaaatacgatatcattattattggaagtggacctggaggttatgtaactggaattaga
gcttcgcaattaggctttaaagttgccattgtagaaaaagaatctttaggtggtatttgt
cttaactggggctgtattcctacaaaagcgttattaaaatctgcccaagtatatgactat
ttaaagcatgttgatcaatatggtttaaaggctgaatctattgataaagattttgatgcc
gtgataaaaagaagtcgtggtgttgctgaaggaatgagcaaaggtgtcgcttttttaatg
aagaaaaacaaaattgatattataaacggttttggtaaaataaaaacagggaaaaaagtt
gatgttactgcagaagatggtactgtaacagaatacagcgcagacaatattattatagca
accggttctcgctctcgtgagttaccaaacttaccgcaagatggtgtaaaagttatagag
tacagaaaagcaatgaccttaccaagtcagccaaaatctatgattgtagtaggttctggt
gccattggtgttgaatttgcacacttttataataccatgggtacagaagttacgattgta
gaatatatgccaaatttagttcctgtagaagatatagacatctcaaaacaatttgagcgt
tctattaaaaaagcaggaattaaagtaatgacaaattcgtctgtagaatctgttgatact
tctggtgaaggagttgttgccactgtaaaaacaaaaaaaggtgacattaaattagaagca
gacattttattatcggcagtgggtataaaatcgaatatcgaaaacattggtttagaagat
gtcggaattattgttgaccgagataaaattcttgtcaatgatttttatcaaactaacatt
ccaggctattatgctattggcgatgtagttcctggacaagctttggcacatgttgcttct
gcagaaggaattacatgtgtagagaaattagcaggtttgcatacagagcctatagattac
ggcaatgttcctggttgcacctatgcaactccagaaattgcttctgttggtttaaccgaa
gcaaaagcaaaagaagctggttacgaattaaaaatcggtaaatttcctttctctgcttca
ggtaaagcaaaagctgctggtactccagatggttttgtaaaagttatttttgatgcaaaa
tatggcgaatggttaggatgtcatatgataggagccggcgtaacagacatgattgcggaa
gctgttttaggtagaaaattagaaactactggtcatgaagtattaaagacaatccatcca
caccccacaatgagcgaggccgtaatggaagctgttgccgatgcatatgatgaagtcatt
cacctttaa

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