Polaribacter litorisediminis: K8354_11915
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Entry
K8354_11915 CDS
T07786
Name
(GenBank) transporter substrate-binding domain-containing protein
KO
K18691
peptidoglycan lytic transglycosylase F [EC:
4.2.2.29
]
Organism
plit
Polaribacter litorisediminis
Brite
KEGG Orthology (KO) [BR:
plit00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
plit01011
]
K8354_11915
Enzymes [BR:
plit01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
K8354_11915
Peptidoglycan biosynthesis and degradation proteins [BR:
plit01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
K8354_11915
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Gene cluster
GFIT
Motif
Pfam:
SLT
SBP_bac_3
Lig_chan-Glu_bd
DUF5779
SLT_2
FAM183
Motif
Other DBs
NCBI-ProteinID:
UAM97026
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All DBs
Position
complement(2798898..2800379)
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AA seq
493 aa
AA seq
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MKNKKINRLYTFIILIIATLFLNLASCKQKKEDTLSQQEKIINPFVANSVDRDLEDIKKD
GVLRALVVYSSTSYFLYRGQAMGFEYELLKQLAKHLDLKLEIVVSKDLDTQFEVLNRGDV
DLIAHGMTITNQRKWEVDFTEHLYLTRQVLVQKMPDNYLNMTWSATQKELIHDPIELIGK
TVSIRKNSAYIERLLSLSNEMGGNIVIDTLDSKLSTDEIIDMVASGEIKYTIADENLAQI
NASFNPNLKIDIPISFSQKIGWVTRKKSSKFRAVVDDWIVSQRRKMNFNVIYNKYFKNKR
TFRQRIRSDYYSLKNNQISKYDDLIKQHATKIGWDWRLLASQVYQESRFDPVAKSWAGAS
GLMQVMPATAVSLGIKDVSDPHESIRGGTDYLDKLYNRFTDINDSINRIKFSLASYNCGY
SHVRDAQRLAKENNLDSTVWSDNVEKMILALSLPKNYNKPFIKYGYVRGEEPANYIEQIF
ERYDHYRQFIPLE
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacaagaaaataaataggctatacacattcataattttaatcattgcaaccctt
ttcttgaacttagcttcctgtaagcagaaaaaagaagatacgcttagtcagcaggaaaaa
ataataaatccttttgttgccaattctgtagatagagatttagaagatattaagaaagat
ggtgttttaagagctttggttgtgtacagcagtacgagttattttttatacagaggtcaa
gctatgggttttgaatatgaacttttaaaacaattggcaaagcatcttgatttaaaatta
gagattgtagtctctaaagatctcgatacacaatttgaagtattaaataggggagatgtt
gatttaatagcacacggtatgacgattacaaatcaacgaaagtgggaagttgattttaca
gaacatttatatttaacaaggcaagtacttgtgcagaagatgccagataattatttaaat
atgacctggagcgctactcagaaggagcttattcatgatcctattgaactaattggtaaa
actgtgtccattagaaaaaattcagcatacatagagcgtttgttaagtttatcaaatgaa
atgggaggaaatattgttattgataccttagacagtaaattgtctacagatgaaattatc
gatatggtcgcttctggagaaataaaatacactatagccgatgaaaacctggcgcaaata
aatgcttctttcaatcctaatcttaagattgatattcctatttctttttctcaaaaaata
ggttgggtaaccagaaaaaagtcatcaaaatttagagctgttgttgatgattggattgtg
tctcaaagacggaaaatgaattttaatgttatttataacaaatactttaaaaataaacgc
acttttagacaacgaataagaagtgattattacagtttaaaaaataatcaaattagtaaa
tatgatgatttgataaagcaacatgccactaaaattggttgggattggagattgctagct
tcacaagtatatcaagaatctcgctttgatcctgttgcaaaatcgtgggcaggtgcaagc
ggtttaatgcaagtaatgccagctacagcggtatctttagggataaaagatgtttctgat
cctcatgaaagtattcgaggaggaaccgattatttagataaactatacaaccgatttaca
gatattaatgactctatcaatagaattaaattttctttagcatcttacaattgcgggtat
agtcatgttagagatgcacaacgattggctaaagaaaataatttagattcaactgtttgg
tcggataatgtagaaaagatgatcttagcgttaagtttgcctaaaaattacaataaacct
tttataaaatatggatatgtaagaggtgaagagcccgctaattatattgagcaaattttt
gagcgctatgaccattacagacaatttattcctttggaataa
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