Polaribacter litorisediminis: K8354_13020
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Entry
K8354_13020 CDS
T07786
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
plit
Polaribacter litorisediminis
Brite
KEGG Orthology (KO) [BR:
plit00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
plit02000
]
K8354_13020
Transporters [BR:
plit02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
K8354_13020
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
Motif
Other DBs
NCBI-ProteinID:
UAM97234
LinkDB
All DBs
Position
complement(3053738..3055657)
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AA seq
639 aa
AA seq
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MKIKNKIILVLFFSIFTFSSCEKYLDIVPDGTQELRLLFNRKETAYNALANCYSYLPQND
GTYSSYALLSDELAVPVPKEPDAIRVMKGQQTVSNPLMGYWSGFGAIGRGQGSLWEGIRS
CNILIENIDLVVDMNESEKNQWKAEVGFLKAFYHFLLLSNYGPIPIIDINLPIDASDEAV
RVERKTVDECFLYITNTIDEAITNLPERVVGNNDLGRIDKVIARAIKARVLLYSASPLFN
GNTEFYSNFVNKDGEHFFNQNFDESKWQLAADAAKEALDAAIAQGVSMYYYTDTPPTFDA
NNFQFKFVRDQYSNRFAITDPWNSELVWGNSSPVTNGQFWQIQSPALMKDPNSSALEAAW
QWLSPTLRMAETYYTKNGLPINEDKNFDYTNRYDVASIAFNQRFYAQFANRTAKLNLDRE
PRFYASLGFDRGINRTWGSIWNLKMRSGETHGRVANTGDFLETGYALKKLVHQDTEGDAY
NKAISYPWPMIRLSELYLNYAEALNEVSGPSALVYESLNMIRERAGIPSVEDAWSNPDNA
ISINKHLSQEGLREIIRQERSIELAFEAHRYYDVRRWKLGTEYFSTPIRGWSINEDSEAN
YYQIKEIGQRSFNSPRDYFQPISFTELSRNPNLVQNPGW
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataaaaaataaaattatactagtattatttttctcaatcttcacttttagtagt
tgtgaaaaatatttagacatcgtaccagatggtacacaagaattaaggttactttttaat
agaaaagaaacagcttataatgcgctagctaattgctacagttatttgcctcaaaatgat
ggtacgtactcaagttatgcgcttttaagtgatgaattggctgtaccagtgccaaaagaa
cccgatgccattagagttatgaaagggcaacaaacggtttctaaccccttaatggggtat
tggtctggttttggtgctattggccgaggacaagggtctttatgggaaggaattagaagt
tgtaatatacttatagaaaatattgatttggttgttgatatgaacgaatcagaaaaaaat
caatggaaagcggaagttggttttttaaaggcattttatcactttttattattaagtaat
tatggccctatcccaataatagatattaatttgcctatagatgcgtctgacgaagccgta
agagtagagagaaaaacagtagatgagtgctttttatacatcacaaacactattgatgag
gccattactaatttacccgaaagagttgttggtaataatgatttaggcagaatagacaag
gtaattgcaagggcaataaaagcaagggtgcttttatatagtgcaagccctttgtttaat
ggaaatactgagttttactcaaatttcgtaaataaagatggcgaacatttttttaatcaa
aattttgatgaatctaagtggcaattagctgcagatgcagcaaaagaggctttagatgct
gcgatagctcaaggggtaagtatgtattattatacagatactccacctacttttgatgcg
aataattttcaatttaaatttgttagagatcaatatagtaatcgttttgcaattacagat
ccttggaattctgaattagtttggggtaactcaagcccagtaactaatgggcagttttgg
caaattcaatctcctgctttaatgaaagatccaaattcatctgctctagaagctgcttgg
caatggttatcgccaactttaagaatggcagaaacctattacacaaaaaacggattaccc
attaatgaggataaaaatttcgattataccaatagatatgatgttgcttctatcgctttt
aatcaacgtttttatgcccaatttgccaatagaactgcaaaattaaacttagatagagaa
cctcgtttttatgcatctttgggttttgataggggtatcaatagaacttggggtagtatt
tggaatttaaaaatgagaagcggagaaacacacggtagagttgcaaatacaggcgatttt
ctagaaacgggttatgctttaaaaaagttggtacaccaagataccgaaggagacgcttat
aataaagccatttcttatccttggccaatgattcgattaagtgaattgtatttaaattat
gcagaggcactaaatgaggttagtgggccatctgcactagtttatgaatctttaaatatg
atacgtgaaagagcaggaataccctcagtagaagatgcttggagtaatccggataacgca
atttctattaacaaacatttaagtcaagaaggtttaagagaaattatacggcaagaaaga
tctatagaactggcttttgaagctcatcgttattacgatgttcgaagatggaaattagga
acagagtatttttcaacgccaattagaggttggtctattaatgaagactccgaagcaaat
tattatcaaattaaagaaataggtcagcgttcttttaactcccctagagattatttccag
cctataagctttacagaattatcaagaaatcctaatctagttcaaaatccaggttggtaa
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