Polaribacter litorisediminis: K8354_13445
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Entry
K8354_13445 CDS
T07786
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
plit
Polaribacter litorisediminis
Brite
KEGG Orthology (KO) [BR:
plit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plit03400
]
K8354_13445
DNA repair and recombination proteins [BR:
plit03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
K8354_13445
Archaeal homologous recombinant proteins
K8354_13445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
ABC_tran
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UAM97318
LinkDB
All DBs
Position
complement(3158107..3161760)
Genome browser
AA seq
1217 aa
AA seq
DB search
MKILKIELQNINSLKSEKPILIDFENEQFRDAGLFAITGSTGAGKTTILDAITIALYQSV
PRFKNSKGSLIDVVSHGANDAFSRVTFENDHLVYEAFWGMRLASKAGKKLNKPIEEVRLK
NLTSKVTLATQKTSLKEEILRVTQLDYNQFLRSVMLAQGEFASFLTAKGPEKGKLLEQIT
GEEIYKKIGQGISDRKSKEESLLRDIQAKINSDDMISEEMKIELNQKDKVLDAEILRTEK
EIEAIQFAVNWYVNFKKLATDSVQLEAVDEVLKADFIYHKNDFQLLDIHEKAAQFQELIQ
NLNRNEKSRTDNINQGIDLKNQLSKLKPQIESIEQQTTKEAISLENSEKEFRDWLPKFDL
VTELDSKLKNEAENRKKTSDKLEELIQQISSLKATKAKLSTELNEKKGYIKKGEAYVASH
KFLEEVDAQISNWTTDLITLKNNKETVKQNLLFVDSQQKKLEITQSEFLKNKKNLDEKLR
EIEKDEKEFTLINLALEKHNLTNLLAEKDKVSATESNWKQFQNLSEQYQKEFKEKDASTK
RQHAFVKSLESIQKEIIDFEKQIKKQETAVLDAERILNLEKSIAKYEEDRQNLVVGEPCS
LCGSTEHPFAVHLDTIGVSKSELEFQNRKIELEKIKESKADLDKKEVSLQTEIVGITKRI
KSIVKEITSIELEASKLNMDCELTNKPRIKTVLDASTEKIKLLNIQITSARKLQIQKDKA
DTILTGKRQSTEALKIKDIAFIEKIKHIELDIQDKQKLIEEGLKSCEILEDSLRVKLSKF
EFKVPSIEQTNRFIDEIESEIRRYKIAQKKLDALKANVAVINTNLVNNQKQLEIHFKTEK
DCKESIEKSEVTSRYLKNERVAILPMNISVETKRKSLQAVKKQLTDKLEESKKERQNLLD
VKTNKEALKIENENAQKKLKEEFIVWSTSLASQLEHSDLNSKQDVENALLHKEDILKYTE
NKEGLKKRQLRLKTLQETNLKDTADLNASKNFEISEEESKLTLEKLKSKNKDLSTEKGKI
FEAFRKDQEIKNRNQEIYKKITNQELICDVWKELFRIIGNSKDAFNTYVQRLTLKHLLDL
ANIHLLKLNKRYSLKMEEVYKPKEELNFNLIDHYQTDQARLVDTSSGGEKFIISLALALG
LSDLASKNVKIDSLFIDEGFGTLDNKTLETVIATLETLQSEGKLIGIISHVENLKERIPT
QIKITKKSNGISTVALI
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattttaaaaatagaattacaaaatataaattcactaaaatcagagaaacctatt
ctgattgattttgaaaacgagcaattcagagacgctggtttgtttgcaattacaggatca
accggagcgggaaaaacaactattttagatgccatcactatagctctgtatcaaagtgtt
ccgcgttttaagaattctaaaggtagtttaatagatgtggtaagtcatggtgccaatgat
gcttttagtagagtaactttcgaaaacgatcatttggtttatgaggctttttggggaatg
cgtttggcttctaaagcaggtaaaaaattaaacaagcctatagaggaggtaagattaaaa
aacttgacaagtaaggttactctggccactcaaaaaacgagtttaaaagaagaaatttta
agggttacgcaattagattataatcaatttttaagatcggtaatgctggctcaaggggaa
tttgcttcatttttaacagcgaaaggtcccgaaaaaggaaaactgctagagcaaattaca
ggagaagaaatctataagaaaattgggcagggaatttcagatagaaaatctaaagaagaa
agtcttttaagagatattcaggctaaaattaattcggatgatatgatatctgaagaaatg
aaaattgaattaaatcaaaaagataaagtattagatgctgaaattctacggacagaaaaa
gagatagaagcaattcagtttgctgtaaattggtatgtaaactttaaaaaattggcaact
gattctgtacaattagaagcagttgatgaagtattaaaagctgattttatatatcataaa
aatgattttcaattattagatatccacgaaaaagcagcacagtttcaagaattaattcaa
aatttaaatagaaatgagaaatctcgcaccgacaacataaaccaaggtattgatttaaaa
aatcaattatctaaattaaaaccacaaattgaaagtatagagcagcaaactacaaaagaa
gcgatatcattagaaaattctgaaaaggaatttcgtgattggttgccaaaatttgacttg
gttacggaactagacagcaagcttaagaatgaagccgaaaacagaaaaaaaacatcagat
aaattagaagaattaattcaacaaattagttctttgaaagctactaaagcaaaattatca
actgaattgaatgaaaaaaaaggctatataaaaaagggggaagcgtatgtagctagtcat
aaatttttagaggaagttgatgcacaaatatcaaattggacaacagatttaatcacgtta
aaaaacaataaggaaactgtaaaacaaaatttgttgtttgttgatagccagcaaaaaaag
ctagaaattacccaatctgaatttttaaaaaacaagaaaaatctcgatgaaaagctgcgt
gaaattgagaaggatgagaaggagtttaccctaattaatctagcattagagaaacataat
ttaacgaatttattggcggaaaaagataaagtatcagccactgaatccaattggaagcaa
tttcaaaatttatcagaacaatatcaaaaagagtttaaagaaaaagatgcttctacaaag
agacagcatgcttttgttaaatcattagaaagtattcaaaaggaaattatcgattttgag
aagcaaattaaaaaacaagaaacggctgttttggatgcagagagaatcttaaatttagaa
aaaagtattgcgaaatatgaagaggatcgacaaaatttagtagttggagaaccttgcagt
ttatgcggttctacagagcatccttttgcagtacatctagacactattggtgtttcaaaa
tcggaattagagtttcagaaccgtaaaattgaattagaaaaaataaaagaatctaaagct
gatttagataaaaaggaggttagtttacaaactgaaattgttgggattacaaaacgaatt
aaatcgattgttaaagaaattacgagcattgaattagaggcgtcaaaattaaatatggat
tgcgaattaacaaataaacctcgtattaaaactgtattagatgcatccacagaaaagata
aaacttttaaatattcaaattacaagtgctcgaaaattgcaaattcagaaggataaagcc
gatacgattttgacgggtaaaagacaatctacagaagctttaaaaataaaagatatcgct
ttcatagaaaagataaaacacatagaattagatattcaggataaacaaaaattgattgag
gaaggattaaagtcttgtgaaattttagaggatagtttgcgagttaaattatctaaattc
gaattcaaagtaccttcaatagaacaaacgaataggtttatcgatgaaattgaaagcgaa
attagacgctataagattgctcaaaagaagttagatgccttaaaagcgaacgttgcggtt
atcaatactaatttggtgaataatcaaaaacaattagaaattcattttaaaactgaaaaa
gattgtaaagaatcgatcgaaaaatctgaggttacttctagatatttaaaaaatgaacgc
gttgctattttacccatgaatatatcggttgaaacaaaaagaaaaagtttacaagctgtt
aaaaaacagttgacggataaattagaagaaagtaaaaaggagcggcaaaacctattagac
gttaaaactaacaaggaagctctaaaaattgaaaatgagaatgctcaaaagaagttaaaa
gaagagttcattgtttggtctacctcactagcttcacaactagaacatagtgatttgaat
tcgaaacaagatgttgaaaatgctttgttgcataaagaagatatcttaaaatatactgaa
aataaagaaggtttaaaaaagcgacaacttcgattaaaaacattacaggaaacaaattta
aaggatacagcagatttaaatgcctccaaaaattttgaaatttcagaagaagaaagtaag
cttactttagagaaattaaaaagtaaaaacaaagacttatcaacggaaaaaggtaaaata
tttgaagcatttagaaaagaccaagaaattaaaaataggaatcaagaaatctataaaaaa
ataacaaatcaagaattaatttgcgatgtttggaaagaattatttcgaattataggaaac
tcaaaagatgcgtttaacacctatgtgcaaagacttactttaaagcatttattagatttg
gcgaacatacatttattgaagttaaacaaacgatattctttaaaaatggaagaagtttac
aaaccaaaagaagaacttaattttaatttaattgatcattatcaaacagatcaagcaagg
ttagtagatacttcaagtggtggagaaaagtttattattagtttggctttggcattagga
ttgtctgatttggctagtaaaaatgtaaaaatagattctttatttatcgatgaaggattc
ggcactttagacaataaaacgctagaaaccgttattgctactttagagactttgcaatca
gaaggcaaattaattggcattatttcacatgtagaaaatttaaaagaacggattccaacc
caaataaaaatcacaaaaaaaagtaacggaattagtacagttgcgctgatataa
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