KEGG   Polaribacter litorisediminis: K8354_14100
Entry
K8354_14100       CDS       T07786                                 
Name
(GenBank) HsdR family type I site-specific deoxyribonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
plit  Polaribacter litorisediminis
Brite
KEGG Orthology (KO) [BR:plit00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:plit02048]
    K8354_14100
Enzymes [BR:plit01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     K8354_14100
Prokaryotic defense system [BR:plit02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   K8354_14100
SSDB
Motif
Pfam: T1RH-like_C SWI2_SNF2 HSDR_N T1R_D3-like ResIII DUF7229 TPK_catalytic Methyltransf_FA DUF87
Other DBs
NCBI-ProteinID: UAM97439
LinkDB
Position
complement(3305213..3308350)
AA seq 1045 aa
MKFTEAQLENVFIELLGKEGIPHVLGNTIARKQDEVLIKADIKNYLQNNYQKENITANEI
ESVIRKLQIFSASDLYESNKQIMKLVCNGFQLEREDRSKKDLYIHLLDYSERDNNVYKIV
NQLEIFGYEKRIPDGILYINGLPLVVMEFKSAIRKNATLHNAYEQQTVRYRRDIPELFKY
NAFCIISDGINSKMGSFFANYEFYYAWRKVLGLDKEVDGINSMYTMIQGLFNKSRLRQVI
HHFIYFPDSNKHDLKIVCRYPQYYAATKLLENIKLHQKPKGDGKGGTYFGATGCGKSYTM
LFLARLLMRSKHFKSPTLVIITDRTDLDDQLSGQFTNAKGFIGDNTIVSVESRKELKDLL
QGRKSGGVFLTTIHKFTEDLELLTERNNVICISDEAHRSQINLDQKIKVTEYGVEKTYGF
AKYLHDSLPNATYVGFTGTPIDATLSVFGDIIDSYTMTESEKDDITVRIVYEGRAAKVIL
ESKKLYEIEDYYRVCAEEGANDYQIEESKKASANMNAVIGDPDRIKAVAEDFVKHYETRI
EEGATLKGKALFVCSSRPIAFNLYQEIIALRPEWTALKAFEEGSELSEKEKKEIKPMERI
KMIMTRGKDDPKEMYHLLGTKDDRKELDRQFKNEKSNFKIAIVVDMWLTGFDVPFLDTMY
IDKPIQQHNLIQTISRVNRKYKTKEKGLVVDYIGFKKQMNLALKQYSALDGQNFEDIETS
IVVVKDQLDLLAKLFHRFDASDYFSGIGIKQLECLNKGAEFVQLTKNLETRFMNIVKRLK
AAYDICCGANEFTELQKDHIHFYVAIRSIVFKLTKGNAPDTAQMNAKVRELIKEALQSDG
VEEIFKLGEDNQSEIDIFDEAYLAKIEKIKLPNTKIKLLQQLLLKAIDELKKTNKVQGID
FSKKFKSIVDKYNERKDDDILQSRVLEDFTDEIIDLYQELRKEKSSFQDMGIDFEEKAFY
DILKAIAHKYDFDYPEDKLIHLAKEVKKVVDDKAKYTDWNHRDDIKAELKVDLIILLAEN
GYPPITKDEVYKEIFEQAENFKNHR
NT seq 3138 nt   +upstreamnt  +downstreamnt
atgaaatttacagaagcacaattagaaaatgtttttatagaattattgggtaaagaaggg
attcctcatgttttaggcaatacaattgctcgtaaacaagatgaagtattgatcaaagca
gatatcaaaaattatttacagaataattatcaaaaagaaaacattacagcgaatgaaata
gaaagtgtaattagaaaattacaaatttttagtgcttcagatttgtatgagtccaacaaa
caaattatgaaattggtttgtaatgggtttcaattagaaagagaagatcgttctaaaaaa
gacctatacattcatctgttagattattctgaaagagataataacgtttataaaattgta
aatcaattagaaattttcggttacgaaaaacggattccagatggtattttatacatcaat
ggtttgccattagtggttatggagtttaaatctgcaattcgtaaaaatgcaacgctacat
aatgcttacgaacagcaaacagttcgatatagaagagatattccagagttatttaaatac
aatgctttttgtataattagcgatggtataaatagtaaaatgggttcgttttttgcgaat
tatgagttttattatgcttggcgtaaagtattgggattagataaagaagtagacggcatc
aattcgatgtataccatgattcaaggtttatttaataaaagcagattaaggcaagttatt
catcatttcatttactttccagatagcaataaacacgatttaaaaattgtgtgtcggtat
ccacaatattatgcagcaacaaaattattagagaacataaagctgcatcaaaaaccaaaa
ggagacggtaaaggaggaacgtattttggagcaacaggttgtggtaaaagttacaccatg
ttgtttttggctcgtttgttaatgagaagtaaacattttaaaagtccaactttagtaatt
ataacagatagaacagatttagatgatcaattatcggggcagtttacaaatgctaaaggt
tttattggcgataataccatagttagtgtagaaagtagaaaagaattaaaagacttactt
caaggcagaaaaagtggtggtgtctttttaacaaccattcataaatttacagaagacctt
gaactactaacggaacgaaacaatgtaatttgtatttctgatgaagcgcatagaagtcaa
attaatctagatcaaaaaataaaagttacagaatatggtgtagagaaaacttacggtttt
gctaaatatttgcacgattcactacccaatgcaacgtatgtaggttttacaggtacgcca
attgatgcaacgttaagtgtctttggagatattatagattcctataccatgacagaatct
gaaaaagatgatattacggtaagaatcgtatatgaaggaagagccgcaaaagtaatttta
gaaagtaaaaaactatacgaaatagaggattattacagagtttgtgcagaagaaggcgca
aacgattatcaaatagaagaaagtaaaaaagcctctgcaaatatgaatgctgtcattggt
gaccctgatagaattaaagcagtggcagaagattttgtaaaacattatgaaacgagaatt
gaagaaggtgctactttaaaagggaaggctttatttgtttgtagttctagacccatagca
tttaatttatatcaagaaattattgctttacgtccagaatggacagcattaaaagcattt
gaagaaggctcagagttgtcagaaaaagaaaagaaggaaatcaaacccatggagcgcatc
aaaatgatcatgacacgtggtaaagatgatccaaaagagatgtaccacttattaggaaca
aaagacgacagaaaagagctagatcgacagtttaaaaatgaaaaatctaactttaaaatt
gctattgtagtagatatgtggttaacaggttttgatgttccttttttagataccatgtat
atagataagccaattcagcaacataatttaatacagactatttctagagtcaatagaaaa
tataaaactaaagaaaaaggcttggtcgtagattatattggttttaaaaagcaaatgaat
ttggctctaaaacaatattctgctttagatggtcagaactttgaagatatagaaacgtct
attgttgttgtaaaagatcaattagatttattagcaaaactgtttcatcgatttgatgct
tcggattacttttctggaataggcatcaaacaattagaatgtttaaataaaggagccgaa
tttgttcagcttaccaagaatttagaaacacgttttatgaatattgtaaagcgtttaaaa
gctgcctacgatatttgttgtggagctaatgagtttacagaacttcaaaaagatcatatt
catttttatgtagcaattcgttctatagtgtttaagttaacaaaaggaaatgcgcccgat
actgcgcaaatgaatgctaaagttagagaattgataaaagaagctttacaaagtgatgga
gttgaggaaatttttaagttaggtgaagataatcagagcgaaatagatatttttgatgaa
gcatatttagccaaaattgaaaaaataaaactaccaaataccaaaataaagctattacag
cagttgcttttaaaggctatcgatgaattaaagaaaacaaataaagttcaaggaatagat
ttttctaaaaagtttaaaagtatcgttgataaatacaatgagcgtaaagacgatgatatt
ttacaaagtagagttttggaagatttcacagatgaaattattgacttataccaagaatta
agaaaagagaaaagttcttttcaagatatgggaattgattttgaagaaaaagcattctat
gatattctgaaagctattgctcataaatatgattttgattatcctgaggataaattaatt
cacttggctaaagaagtcaagaaagtagtggatgataaagctaaatacacagattggaat
catcgtgatgatataaaagcagaattaaaagtagatttaataattctattagcagaaaat
ggatatccgcccattaccaaagatgaagtttataaagagatttttgaacaagcagagaat
tttaagaatcatagataa

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