Polaribacter litorisediminis: K8354_14750
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Entry
K8354_14750 CDS
T07786
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
plit
Polaribacter litorisediminis
Pathway
plit03030
DNA replication
plit03410
Base excision repair
plit03420
Nucleotide excision repair
plit03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K8354_14750 (polA)
03410 Base excision repair
K8354_14750 (polA)
03420 Nucleotide excision repair
K8354_14750 (polA)
03440 Homologous recombination
K8354_14750 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plit03032
]
K8354_14750 (polA)
03400 DNA repair and recombination proteins [BR:
plit03400
]
K8354_14750 (polA)
Enzymes [BR:
plit01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K8354_14750 (polA)
DNA replication proteins [BR:
plit03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
K8354_14750 (polA)
DNA repair and recombination proteins [BR:
plit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
K8354_14750 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K8354_14750 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_5
RNase_H_2
HHH_2
HHH
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
UAM97550
LinkDB
All DBs
Position
3473907..3476762
Genome browser
AA seq
951 aa
AA seq
DB search
MADQKRVFLVDAYALIFRGYYAFIKNPRINSKGLDTSAIMGFMNSLLDVIKRERPDHLAV
CFDQGGSADRVEMFEAYKANRDATPEAIKLAIPYIKEILKAMHIPIMVKEGFEADDVIGT
LSKQAEKEGYQTFMVTPDKDFAQLVSENIFMYKPRFGGGYDIWGVPEVLAKFGITDPLQV
IDYLGMIGDASDNIPGLPGVGEKTAKKFLAAYGTVENLLANTHELKGKMKEKVEGAKELG
LLSKKLATIMLDVPVSFHAKDFELNQPNLEKVTEIFNELEFRNLLTNFLKTFDTETIKNT
PKTAKNSTSAALEKSKYNKAASVVAGQFDLFAAPGAGNMTKAETASGFKSIENTNHFYQH
INTAFARKLLLQKLMQQTSVCFDTETTGLKALEVELIGIAFSFEAGKGYYVSFPENQDET
KTILEEFRPFFESDEIEKIGHNLKYDIKVLSNYAMPVKGKLFDTMIAHYLINPDMRHNMD
ILAETYLNYQPVSISELIGKKGKNQLSMRVVPIADQTEYAVEDADITYQLKEHFTKELEN
GNVIKLFEEVELPLVSVLTSMEIEGININTEFLNELSVALTDDINRLEKNIFEMAGEEFN
IASPKQLGIVLFENMKLVDKPKKTKTGQYKTGEDILSYLAKDHKIIRDIQEYRQYKKLQS
TYVDALPIEINPKTGRIHTQYMQAVAATGRLSSNNPNLQNIPIRTERGREVRKAFIPRNE
NYILLAADYSQIELRIIAALSEEETMIRAFKNGEDIHASTAAKVFNVPLDEVTREQRSNA
KTVNFGIVYGVSAFGLSNQTDLSRSEAKELIDTYYETYPKLKAYMSAQVDFAREHGYVET
VLNRRRYLKDINSRNAVVRGAAERNAVNAPIQGSAADIIKIAMINIHNRFEEENFKSKML
LQVHDELVFDVYKEELETIKPIIKFEMENAFKMNIPLDVEIGTGSNWLEAH
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcaaaaaagagtttttttagtagatgcatatgcattaatttttcgcggatat
tacgcttttattaaaaaccccagaatcaattcgaaaggattagatacctccgccatcatg
ggttttatgaactctcttttagatgttattaaacgagaaagacccgatcatttagccgtt
tgttttgatcaaggaggaagtgctgacagggtagagatgtttgaagcctataaagccaac
agagatgcaactccagaagctataaaattagccataccttatattaaagagattttaaaa
gccatgcacatccccatcatggtaaaagaaggttttgaagcagatgatgttattggtaca
ctatctaaacaagcagaaaaagaaggctaccaaacttttatggtaacaccagataaggat
tttgcacaattggtttctgaaaatatttttatgtataaaccccgttttggtggtggttat
gatatttggggcgttcctgaagtgttagcaaaattcggaataacagatcctttacaagtc
attgattatttaggaatgatcggagacgcttcagacaatattcctgggttacctggggtt
ggcgaaaaaacagccaaaaaatttttagctgcctatggtactgtagaaaatttgttagca
aatacccatgagctaaaaggaaaaatgaaagagaaagtagaaggcgccaaagaattaggc
ttactttctaagaaattggcaaccattatgctagatgttcctgtatcttttcatgccaaa
gattttgaattaaaccaaccaaatcttgagaaagttactgagatttttaacgaactagaa
ttcaggaatctactaaccaatttcttaaaaacatttgacaccgaaacaattaaaaacacc
ccaaaaacggctaaaaatagtacttctgctgcattagaaaaatcaaaatataacaaagca
gcttcagtagtagcaggtcaatttgatttatttgcagctccaggcgcaggaaatatgacc
aaagcagaaactgcatcagggtttaaatctattgaaaataccaatcatttttatcaacat
ataaatactgccttcgcaagaaaattattattgcaaaaattaatgcaacaaacttctgtc
tgttttgacacagaaacgacgggtttaaaagccttggaagttgagttaatcggaattgcg
ttttcttttgaagctggcaaaggatattatgtttcttttccagaaaatcaagacgaaaca
aaaactattttagaagaatttagaccgttctttgaatccgatgaaatcgaaaaaattggt
cataacctaaaatatgatatcaaagtattatccaattatgcgatgcctgtaaaaggcaaa
ttatttgatacgatgattgcgcattacctcatcaatccagatatgcgccataatatggat
attttagcagaaacctatttaaattatcaacctgtttctatctcagaattgattggtaaa
aaaggtaagaatcaactttctatgcgtgtggttccaattgcagatcaaaccgaatatgcc
gttgaagatgccgatattacctaccaactaaaagaacattttacaaaagaattagagaat
ggaaatgtaattaaattatttgaagaagtcgaattgccgcttgtttctgttttaacgtcc
atggaaatcgaaggaattaacatcaacacagaatttctgaacgaattatctgttgcttta
accgatgacattaaccgtttggaaaaaaatattttcgaaatggcaggagaagaattcaat
attgcttcgccaaaacaattagggattgttttattcgaaaatatgaaattggttgataag
cctaaaaagaccaaaacaggtcaatataaaacaggcgaagatatcttatcttatttggca
aaagaccataaaattattagagatattcaagaatatcgtcaatataaaaaattacaaagt
acctatgtagatgcattacccattgaaatcaacccaaaaacagggagaattcatacgcaa
tatatgcaagcagttgcggcaacaggaaggttaagttctaacaatcctaatttacaaaac
ataccgattagaacagaacgcggtcgtgaagttcgtaaagcatttattccaagaaatgaa
aattatattttattagcggcggattatagccagattgagttgcgaattattgcagcttta
agtgaagaggaaacaatgatacgtgcttttaaaaatggcgaggatattcacgcatctacc
gctgcaaaagtttttaacgttccgttagatgaagttacacgcgaacaaagaagcaatgct
aaaacagtaaattttggtattgtttacggagtttctgcttttgggttgagcaatcaaacg
gatttaagtagaagtgaagccaaagaattaattgacacctattatgaaacctatccaaag
ttaaaagcttacatgtctgcacaagtagattttgcgcgcgagcacggttatgtagaaact
gttttaaatagacggcgctatttaaaagatatcaattctagaaacgctgtggtgagaggt
gctgcggaaagaaatgcggtaaatgctcctattcaaggttcggctgctgacattataaaa
atagcgatgattaacattcacaatcgttttgaggaagaaaattttaaatctaaaatgcta
ttacaagtgcatgatgaactagtttttgatgtttataaagaagaattagaaaccattaaa
cccattattaaattcgaaatggaaaatgcttttaagatgaatatacctttggatgtagaa
attgggacaggatctaattggttagaagctcactag
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