Entry |
|
Symbol |
polA
|
Name |
(GenBank) DNA polymerase I
|
KO |
|
Organism |
plit Polaribacter litorisediminis
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:plit00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K8354_14750 (polA)
03410 Base excision repair
K8354_14750 (polA)
03420 Nucleotide excision repair
K8354_14750 (polA)
03440 Homologous recombination
K8354_14750 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:plit03032]
K8354_14750 (polA)
03400 DNA repair and recombination proteins [BR:plit03400]
K8354_14750 (polA)
Enzymes [BR:plit01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K8354_14750 (polA)
DNA replication proteins [BR:plit03032]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
K8354_14750 (polA)
DNA repair and recombination proteins [BR:plit03400]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
K8354_14750 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K8354_14750 (polA)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
3473907..3476762
|
AA seq |
951 aa
MADQKRVFLVDAYALIFRGYYAFIKNPRINSKGLDTSAIMGFMNSLLDVIKRERPDHLAV
CFDQGGSADRVEMFEAYKANRDATPEAIKLAIPYIKEILKAMHIPIMVKEGFEADDVIGT
LSKQAEKEGYQTFMVTPDKDFAQLVSENIFMYKPRFGGGYDIWGVPEVLAKFGITDPLQV
IDYLGMIGDASDNIPGLPGVGEKTAKKFLAAYGTVENLLANTHELKGKMKEKVEGAKELG
LLSKKLATIMLDVPVSFHAKDFELNQPNLEKVTEIFNELEFRNLLTNFLKTFDTETIKNT
PKTAKNSTSAALEKSKYNKAASVVAGQFDLFAAPGAGNMTKAETASGFKSIENTNHFYQH
INTAFARKLLLQKLMQQTSVCFDTETTGLKALEVELIGIAFSFEAGKGYYVSFPENQDET
KTILEEFRPFFESDEIEKIGHNLKYDIKVLSNYAMPVKGKLFDTMIAHYLINPDMRHNMD
ILAETYLNYQPVSISELIGKKGKNQLSMRVVPIADQTEYAVEDADITYQLKEHFTKELEN
GNVIKLFEEVELPLVSVLTSMEIEGININTEFLNELSVALTDDINRLEKNIFEMAGEEFN
IASPKQLGIVLFENMKLVDKPKKTKTGQYKTGEDILSYLAKDHKIIRDIQEYRQYKKLQS
TYVDALPIEINPKTGRIHTQYMQAVAATGRLSSNNPNLQNIPIRTERGREVRKAFIPRNE
NYILLAADYSQIELRIIAALSEEETMIRAFKNGEDIHASTAAKVFNVPLDEVTREQRSNA
KTVNFGIVYGVSAFGLSNQTDLSRSEAKELIDTYYETYPKLKAYMSAQVDFAREHGYVET
VLNRRRYLKDINSRNAVVRGAAERNAVNAPIQGSAADIIKIAMINIHNRFEEENFKSKML
LQVHDELVFDVYKEELETIKPIIKFEMENAFKMNIPLDVEIGTGSNWLEAH |
NT seq |
2856 nt +upstreamnt +downstreamnt
atggcagatcaaaaaagagtttttttagtagatgcatatgcattaatttttcgcggatat
tacgcttttattaaaaaccccagaatcaattcgaaaggattagatacctccgccatcatg
ggttttatgaactctcttttagatgttattaaacgagaaagacccgatcatttagccgtt
tgttttgatcaaggaggaagtgctgacagggtagagatgtttgaagcctataaagccaac
agagatgcaactccagaagctataaaattagccataccttatattaaagagattttaaaa
gccatgcacatccccatcatggtaaaagaaggttttgaagcagatgatgttattggtaca
ctatctaaacaagcagaaaaagaaggctaccaaacttttatggtaacaccagataaggat
tttgcacaattggtttctgaaaatatttttatgtataaaccccgttttggtggtggttat
gatatttggggcgttcctgaagtgttagcaaaattcggaataacagatcctttacaagtc
attgattatttaggaatgatcggagacgcttcagacaatattcctgggttacctggggtt
ggcgaaaaaacagccaaaaaatttttagctgcctatggtactgtagaaaatttgttagca
aatacccatgagctaaaaggaaaaatgaaagagaaagtagaaggcgccaaagaattaggc
ttactttctaagaaattggcaaccattatgctagatgttcctgtatcttttcatgccaaa
gattttgaattaaaccaaccaaatcttgagaaagttactgagatttttaacgaactagaa
ttcaggaatctactaaccaatttcttaaaaacatttgacaccgaaacaattaaaaacacc
ccaaaaacggctaaaaatagtacttctgctgcattagaaaaatcaaaatataacaaagca
gcttcagtagtagcaggtcaatttgatttatttgcagctccaggcgcaggaaatatgacc
aaagcagaaactgcatcagggtttaaatctattgaaaataccaatcatttttatcaacat
ataaatactgccttcgcaagaaaattattattgcaaaaattaatgcaacaaacttctgtc
tgttttgacacagaaacgacgggtttaaaagccttggaagttgagttaatcggaattgcg
ttttcttttgaagctggcaaaggatattatgtttcttttccagaaaatcaagacgaaaca
aaaactattttagaagaatttagaccgttctttgaatccgatgaaatcgaaaaaattggt
cataacctaaaatatgatatcaaagtattatccaattatgcgatgcctgtaaaaggcaaa
ttatttgatacgatgattgcgcattacctcatcaatccagatatgcgccataatatggat
attttagcagaaacctatttaaattatcaacctgtttctatctcagaattgattggtaaa
aaaggtaagaatcaactttctatgcgtgtggttccaattgcagatcaaaccgaatatgcc
gttgaagatgccgatattacctaccaactaaaagaacattttacaaaagaattagagaat
ggaaatgtaattaaattatttgaagaagtcgaattgccgcttgtttctgttttaacgtcc
atggaaatcgaaggaattaacatcaacacagaatttctgaacgaattatctgttgcttta
accgatgacattaaccgtttggaaaaaaatattttcgaaatggcaggagaagaattcaat
attgcttcgccaaaacaattagggattgttttattcgaaaatatgaaattggttgataag
cctaaaaagaccaaaacaggtcaatataaaacaggcgaagatatcttatcttatttggca
aaagaccataaaattattagagatattcaagaatatcgtcaatataaaaaattacaaagt
acctatgtagatgcattacccattgaaatcaacccaaaaacagggagaattcatacgcaa
tatatgcaagcagttgcggcaacaggaaggttaagttctaacaatcctaatttacaaaac
ataccgattagaacagaacgcggtcgtgaagttcgtaaagcatttattccaagaaatgaa
aattatattttattagcggcggattatagccagattgagttgcgaattattgcagcttta
agtgaagaggaaacaatgatacgtgcttttaaaaatggcgaggatattcacgcatctacc
gctgcaaaagtttttaacgttccgttagatgaagttacacgcgaacaaagaagcaatgct
aaaacagtaaattttggtattgtttacggagtttctgcttttgggttgagcaatcaaacg
gatttaagtagaagtgaagccaaagaattaattgacacctattatgaaacctatccaaag
ttaaaagcttacatgtctgcacaagtagattttgcgcgcgagcacggttatgtagaaact
gttttaaatagacggcgctatttaaaagatatcaattctagaaacgctgtggtgagaggt
gctgcggaaagaaatgcggtaaatgctcctattcaaggttcggctgctgacattataaaa
atagcgatgattaacattcacaatcgttttgaggaagaaaattttaaatctaaaatgcta
ttacaagtgcatgatgaactagtttttgatgtttataaagaagaattagaaaccattaaa
cccattattaaattcgaaatggaaaatgcttttaagatgaatatacctttggatgtagaa
attgggacaggatctaattggttagaagctcactag |