Polaribacter litorisediminis: K8354_17785
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Entry
K8354_17785 CDS
T07786
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
plit
Polaribacter litorisediminis
Brite
KEGG Orthology (KO) [BR:
plit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plit03400
]
K8354_17785 (radA)
DNA repair and recombination proteins [BR:
plit03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
K8354_17785 (radA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
DnaB_C
AAA
Zn_ribbon_LapB
ChlI
DUF7125
AAA_22
Lon_C
AAA_24
AAA_16
nSTAND_NTPase5
AAA_14
AAA_5
RsgA_GTPase
CobU
NTPase_1
NACHT
Rad51
nSTAND3
ABC_tran
Zeta_toxin
DAP3
SLFN-g3_helicase
MCM
AAA_18
AAA_29
RuvB_N
Motif
Other DBs
NCBI-ProteinID:
UAM98104
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Position
complement(4163948..4165309)
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AA seq
453 aa
AA seq
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MAKTKTTFFCQNCGTQHAKWVGQCGACKEWNTIVEEVIQKEEKRVWKQSTTAKQVVNKPL
KIADIQLNPEERVITNNKELDTVLGGGLVKGSVTLLGGEPGIGKSTLLLQVALNIRQKVL
YVSGEESQSQIKMRAERLEANNSNCLILTETNTQQIFKNIEETAPEVLVIDSIQTLHTSS
IEASPGSISQIRETAAELIKYAKETATPVLLIGHINKEGNIAGPKILEHMVDVVLQFEGD
RNHTYRILRSQKNRFGSTSELGIYEMLSNGLREISNPSEILISKKDADLSGTAIASTLEG
IRPLMIEIQALVSTAVYGTPQRSTTGYNLKRLNMILAVLEKRAGFKLGAKDVFLNITGGI
NVDDPAIDLAVVAAILSSNQDIAINPNVCFAAEVGLAGEIRPVSKIDQRILEAEKLGYKT
FVASKYNKISSKNHGIKLVLVGKIEEAFATLFA
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaaccaaaacaacttttttctgtcagaattgtggtacacaacatgcaaaatgg
gtaggtcaatgtggcgcatgtaaagaatggaacactattgtagaagaagtaatacagaaa
gaagaaaaacgcgtttggaaacaatctactacagcaaagcaggttgtaaacaaaccatta
aagattgcagatattcagttgaacccagaagaaagggtaattaccaataacaaggaatta
gacacggttttaggtggtggtttggtaaaaggctctgtaacgcttttaggaggggaaccc
ggaattggaaaatcgactttattactgcaagttgctttaaatattcgtcaaaaggtattg
tatgtttctggggaagaaagccaatctcaaataaaaatgagagcagaaaggcttgaagcg
aacaattctaattgtttaattttaactgaaaccaacacccaacaaattttcaaaaatata
gaagaaacagctcccgaagttctagtaatcgattctattcaaactttacatacaagttct
attgaagcttctcctggaagtatttctcaaattagagaaactgctgcagaactcataaaa
tatgctaaagaaaccgcaactcctgtgctgttaattggtcatataaacaaagaaggaaac
attgctggtcctaaaatcttagaacacatggttgatgttgttttgcaatttgaaggcgac
agaaatcatacctacagaattttgcgatctcaaaaaaacaggtttggctctacgtcagaa
ttaggtatttacgaaatgctttccaacggattgcgagaaatttcaaatccgtctgaaata
ttgatttctaaaaaagatgccgatttaagcggcactgcgattgcatcaactttagaaggc
attcgacctttaatgattgaaattcaggccttggtttcaacagctgtttacggaactcca
caaagatctacgactggttataacctaaaacgcttaaacatgattttggcagttttagaa
aaaagagcaggctttaaattaggagcaaaagatgtttttttaaatattactggaggcatt
aatgttgatgatcctgctattgatttggcagtagttgccgctattttatcatccaatcaa
gatattgccattaacccaaatgtttgttttgcagcagaggttggtttggcaggagaaata
agacccgtatcaaaaattgatcaacgaattttagaagcagaaaaattagggtataaaact
tttgtagcctcaaaatacaataagatttcttctaaaaaccacggaattaaactcgtttta
gttggtaaaattgaagaagcttttgccactttatttgcatag
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