Purpureocillium lilacinum: 28883666
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Entry
28883666 CDS
T05029
Symbol
PLICBS_000390
Name
(RefSeq) cleavage polyadenylation factor subunit clp1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
plj
Purpureocillium lilacinum
Pathway
plj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
plj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
28883666 (PLICBS_000390)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plj03019
]
28883666 (PLICBS_000390)
Enzymes [BR:
plj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
28883666 (PLICBS_000390)
Messenger RNA biogenesis [BR:
plj03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
28883666 (PLICBS_000390)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
AAA_16
nSTAND3
ATP_bind_1
ABC_tran
Sigma54_activat
AAA_22
TsaE
SRP54
Zeta_toxin
CbiA
Myosin_head
AAA_24
AAA_29
APS_kinase
PRK
cobW
Peptidase_S13
Motif
Other DBs
NCBI-GeneID:
28883666
NCBI-ProteinID:
XP_065455662
LinkDB
All DBs
Position
Unknown
AA seq
457 aa
AA seq
DB search
MSIPGLGQIPTQQAATSSTRVVSLKPAWEWRFQIPVGRSLGLKVLSGTAEKDGIELAPRS
TYTLPGGTASKILTWHGCELEIEGRSDNGSDSVAEYATPAANPANAHVNLHARLSELRAA
AAREGREGPRVLITGHSGAGKTALTRTLTSYATRQGEQPLTVNTDPRDGMLSLPGTLSAA
VFATVMDPEARDGWGGTPTSGPSVVPVKLPLVYFYGRADAEEEPDFYKALVSRLAGAVSG
RLSEDVDVRSSGVLVDGTGLSEDNTVAMDLLAHVVDELSINIVVVLGSTPLHAELGRRFA
SERTSLGVPIQVVGLDQSDGVVERDESFAEHVREQIIKEYFFGDAKRTLSPQIQQVDFDS
LIIYKVADDSEEAHGPDMLVREEPSSLMQHWTLAVMHAANKDPAETVRAASVMGFVYVSD
VDEERRKVKVLAPIGGRLGDRPLVWGRWPEPYMNLLG
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatcccagggctagggcaaataccgactcaacaggccgccacctcgtccacgcgc
gtcgtctccctcaagcccgcctgggaatggcgcttccagatacccgtcggccgcagcctc
gggcttaaggtcctctccggtaccgctgagaaggacggcatcgaactcgccccgcgaagc
acatacaccctccccgggggcaccgcgtccaagattctcacgtggcacggctgcgagctc
gagatcgagggtcgctcggacaatggcagtgactccgtcgccgaatacgcgacaccagcg
gcgaacccggccaatgcgcatgtgaatctccatgcgcgactcagcgagctgcgcgccgct
gctgcgcgcgaggggagagaaggccctcgcgtgctcattacggggcatagtggcgcgggt
aagactgctcttacgcgcacgctgacgagctacgcgacgaggcagggcgagcagcccctt
acggtcaatacggacccgcgcgacggcatgcttagcctgccgggcactctgagcgcggcc
gtcttcgcaacggtcatggatcccgaggcgcgcgatggctggggcggcacgccgacgagt
gggccgagtgttgtgcccgtcaaactgccgctcgtctacttttacgggcgagcggacgcc
gaagaggagcccgacttctacaaggcgctcgtgagtaggctagccggcgcagttagcggg
cggttgagcgaggatgttgatgtgcgcagctcaggagtccttgtggacgggacagggctg
agcgaggacaataccgtggccatggacttgctggcccacgtcgttgacgagctctccatt
aacattgtcgtcgtgctcgggtcgacgcccttgcacgctgagctgggcaggcggttcgcg
agcgagaggacgagcttgggcgtgccgatccaagtggtaggcttggatcagtcagacggc
gtggtcgagcgagacgagtcctttgccgagcacgtccgcgaacaaataatcaaggagtat
ttcttcggcgacgcgaagcggacacttagcccgcagatccagcaggtcgatttcgacagc
ctgatcatttacaaggtggctgacgattccgaggaggcgcacgggccggatatgctcgtg
cgggaagagccgtcgtcgctgatgcagcactggacgttggcggtgatgcacgcggccaac
aaggacccggcagagacggtgcgcgcggcaagcgtcatggggttcgtgtatgtgtccgac
gtggatgaggagcggcgcaaggtcaaggtgttggcgccgatcgggggccggctgggtgac
aggccgctcgtgtgggggcggtggccggagccgtacatgaacctcctggggtaa
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