Purpureocillium lilacinum: 28888828
Help
Entry
28888828 CDS
T05029
Symbol
PLICBS_009252
Name
(RefSeq) SM-like, degradation of cytoplasmic mRNAs and positively regulates transcription initiation
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
plj
Purpureocillium lilacinum
Pathway
plj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
28888828 (PLICBS_009252)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plj03019
]
28888828 (PLICBS_009252)
Messenger RNA biogenesis [BR:
plj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
28888828 (PLICBS_009252)
mRNA degradation factors
5'-3' decay
Lsm complex
28888828 (PLICBS_009252)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
28888828
NCBI-ProteinID:
XP_065457667
LinkDB
All DBs
Position
Unknown
AA seq
171 aa
AA seq
DB search
MENLSISDAPPAAPPPQGPSQPGGPSQPPPQLPPQMFTTAAQLLDLTDKKLMVVLRDGRK
LIANIVLQSTTERIFATNPDSAISDAAPRGLYADISHGIFLVRGENVLLLGEIDLDRDDD
PPPGYEPAELELVKRLADEKKAAEKARDKSRLKKLAKMGFEGESQGEIVLG
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacctctccatctccgacgcccctccggcggctcctccgccccagggcccttcg
cagcccggcggcccgtcccagccgcctccccagcttccgccgcagatgttcacgacggcc
gcacagctcttggatctcacagacaagaagctcatggtcgttctgcgcgatggcaggaag
cttatcgctaacattgtgctacaatcgacgacggaacgcatcttcgcgaccaacccggac
agcgccatctctgacgccgccccgcggggcctctacgccgacatttcgcacggcatcttt
ctcgtccgcggcgagaacgtcctcctcctgggcgagatcgacctcgacagggacgacgat
ccgcccccgggctacgagcccgcagagctggagctcgtcaagaggcttgcggacgagaag
aaggccgctgagaaggcccgggataagtcgcgcctcaagaagctcgcaaagatgggcttt
gagggcgagagccaaggagagattgtccttggatga
DBGET
integrated database retrieval system
