Plantactinospora sp. KBS50: CIK06_00040
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Entry
CIK06_00040 CDS
T05048
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
plk
Plantactinospora sp. KBS50
Brite
KEGG Orthology (KO) [BR:
plk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plk03032
]
CIK06_00040
03400 DNA repair and recombination proteins [BR:
plk03400
]
CIK06_00040
Enzymes [BR:
plk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CIK06_00040
DNA replication proteins [BR:
plk03032
]
Prokaryotic type
DNA Topoisomerases
CIK06_00040
DNA repair and recombination proteins [BR:
plk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CIK06_00040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
TPD52
Motif
Other DBs
NCBI-ProteinID:
ASW52919
UniProt:
A0A248YH39
LinkDB
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Position
8795..11263
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AA seq
822 aa
AA seq
DB search
MAAVVSHDRIEPVGLEVEMQRSYLDYAMSVIVGRALPDVRDGLKPVHRKILYAMFDSGYR
PDRGYVKCSRVVGDVMGQFHPHGDSAIYDALVRMAQPWSLRYPLVDGNGNFGSPGNDPAA
AMRYTECKLDPLAMEMLRDIDEDTVDLQDNYDGRAKEPTILPSRIPNLLVNGSEGIAVGM
ATKIPPHNLREIAGAVQWCLEHPEADEAETLDALIGIVKGPDFPTHGLIVGTGPIQDAYR
TGRGSIRMRAVVEVEEDRRGRASLVVTELPYQVNPDNLAERIAELIKEGKLAGIADIKDE
SSGRTGMRLVLVLKRDAVAKVVLNNLYKHTQLQETFGANMLALVDGVPRTLNLAQFIRYY
VEHQIDVIRRRTAYRLRKAEERAHILRGLVKALDALDEVIALIRRSPTVEEARQGLINLL
TIDEVQATAILDMQLRRLAALERQKIVDELAKIELEIADYRDILAKPERQRKIISDELGE
IVAKWGDERRTRIVPFDGEVSMEDLIAREDVVVTITRTGYAKRTKVDLYRSQRRGGKGVS
GATLRQDDIVSHFFVCSTHDWMLFFTNKGRVYRAKAYELPEANRVARGQHVANLLAFQPD
EQIAQVIKIPDYRVAPYLVLATSKGLVKKTRLEEFDSNRSGGIIAINLRDGDELVGAALA
GPEDDLLLVSKNAQAIRFNATDEALRPMGRATSGVIGMRFTDEDVLLAMEVVREGMDVLV
ATNGGYAKRTPIEEYPVQGRGGKGVLTAKITERRGGLVGAVVISPDDELFAITSNGGVIR
TPVKPVRRTRDRNTMGVKLMDLPDGVTIVAIARNADEPDEQD
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
ctggccgccgtcgtctcgcacgaccgcatcgagccggtcggcctcgaggtggagatgcag
cgctcctacctcgactacgcgatgagcgtcatcgtgggtcgggcgctgccggacgtccgc
gacgggctcaagccggtccaccgcaagattctctatgcgatgttcgactccggctaccgg
ccggaccgcggctatgtgaagtgctcccgggtcgtcggcgacgtgatgggccagttccac
ccgcacggcgactcggccatctacgacgcgctggtccggatggcccagccctggtcgctg
cggtacccgctggtggacggcaacggcaacttcggttcgccgggtaacgatcccgcggcg
gccatgcgctacaccgagtgcaagctggacccgctggccatggagatgctgcgggacatc
gacgaggacaccgtcgacctgcaggacaactacgacggtcgggcgaaggagccgacgatc
ctgccgtcgcgcatcccgaacctgctggtgaacggctccgaaggcatcgcggtcgggatg
gccaccaagatcccgccgcacaacctgcgggagatcgccggcgccgtccagtggtgcctg
gagcacccggaggcggacgaggcggagacgctggacgcgctgatcggcatcgtgaagggt
ccggacttcccgacccacggcctgatcgtcggcaccgggccgatccaggacgcgtaccgg
accggccgcggctcgatccggatgcgcgccgtggtggaggtcgaggaggaccgccgcggt
cgggcgagcctggtggtgaccgagctgccctaccaggtgaacccggacaacctggccgag
cggatcgccgagctgatcaaggagggcaagctcgccggcatcgccgacatcaaggacgag
tcgtcggggcgtaccggcatgcggctggtgctggtgctcaagcgggacgccgtggcgaag
gtggtgctgaacaacctctacaagcacacccagctccaggagacgttcggcgcgaacatg
ctcgcgctggtcgacggcgtaccccggacgctgaacctggcgcagttcatccgctactac
gtcgagcaccagatcgacgtgatccggcggcggaccgcgtaccggttgcgcaaggccgag
gaacgggcgcacatcctgcgcggtctggtgaaggcgctggacgcgttggacgaggtgatc
gcgctgatccgccgctcgccgacggtcgaggaggcccggcagggtctgatcaacctgctg
accatcgacgaggtgcaggccacggcgatcctggacatgcagcttcgccggctcgccgcg
ctggaacgtcagaagatcgtcgacgagctggcgaagatcgagctggagatcgccgactac
cgggacatcctcgcgaagccggagcggcagcggaagatcatctcggacgagctcggcgag
atcgtggcgaagtggggcgacgagcggcgtacccggatcgtgccgttcgacggcgaggtc
tcgatggaggacctgatcgcccgcgaggacgtagtggtgacaatcacacggaccggctac
gccaagcggaccaaggtcgacctctaccgttcgcagcgccgcggcggcaagggcgtcagc
ggcgccaccctgcgccaggacgacatcgtcagccacttcttcgtctgctcgacgcacgac
tggatgctgttcttcaccaacaagggtcgggtgtaccgggcgaaggcgtacgaactgccg
gaggcgaaccgggtggcccgcgggcagcacgtggcgaacctgctggccttccaaccggac
gaacagatcgcccaggtcatcaagatcccggactaccgggtcgcgccgtacctggtgctg
gccaccagcaagggtctggtcaagaagacccggctggaggagttcgactcgaaccgctcc
ggtggcatcatcgcgatcaacctgcgggacggcgacgagttggtcggcgccgcgctcgcc
ggcccggaggacgacctcctgttggtatccaagaacgcgcaggcgatacggttcaatgcc
acggacgaggcgttgcgtccgatgggccgggcgacatccggtgtcatcgggatgcggttc
acggatgaggacgtcctgttggccatggaggtggtccgcgagggcatggacgttctcgtg
gcaacgaacggagggtacgcaaaacgtaccccgatcgaggaataccccgtccagggccgg
ggaggtaaaggtgtgctcaccgcgaagatcaccgaacgacgcggcgggctggtcggtgcc
gtggtgatcagcccggacgacgagctgttcgcgatcaccagcaacggtggcgtcatccgg
actcccgtgaagcctgtacgccgtactcgcgatcggaacacaatgggggtcaagttgatg
gaccttccagacggcgtaacaatcgtggccattgctcgcaatgccgacgagcctgacgaa
caggactag
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