Plantactinospora sp. KBS50: CIK06_02265
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Entry
CIK06_02265 CDS
T05048
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
plk
Plantactinospora sp. KBS50
Brite
KEGG Orthology (KO) [BR:
plk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plk03032
]
CIK06_02265 (topA)
03400 DNA repair and recombination proteins [BR:
plk03400
]
CIK06_02265 (topA)
Enzymes [BR:
plk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CIK06_02265 (topA)
DNA replication proteins [BR:
plk03032
]
Prokaryotic type
DNA Topoisomerases
CIK06_02265 (topA)
DNA repair and recombination proteins [BR:
plk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CIK06_02265 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_4
MarR_2
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
ASW53255
UniProt:
A0A248YHZ7
LinkDB
All DBs
Position
501425..504382
Genome browser
AA seq
985 aa
AA seq
DB search
MPSSARSNRLVIVESPAKAKTISGYLGPGYVVEASFGHVRDLPRNAAEVPSGYEDKPWAR
LGVDVDNGFAALYVVSPDRRKQITKLRSLVKEVDEVFLATDEDREGEAIAWHLVETLKPK
VPVRRMVFHEITRPAIQAAVANPREIDRDLVDAQEARRILDRLYGYEVSPVLWRKVRSGL
SAGRVQSVATRIVVERERQRMAFRSAEYWDILATLAVREAGEGPRTFGATLVALNGDRIA
TGKDFEPTTGRVRPGAGVTHLDEAGARGLAARLDGRPFTVTRVEEKPYRRRPYAPFITST
LQQEAARKLRFSSQQTMRTAQRLYENGYITYMRTDSVNLSETAIAAARRQIAELYGDRSV
PPEPRRYTGKVKNAQEAHEAIRPAGDNFRTPGDVAKELPAEEYRLYELIWRRTIASQMTD
AVGSSVSVRIRAVSSASEEVDFAATGKTITDPGFLRAYVESSDDENAEAEDAERRLPTLV
KDQPLSAQELAAQGHHTQPPSRYTEASLVKALEELGIGRPSTYASIMQTIQDRGYVSKRG
QALIPSFLAFAVVGLLERHYPRLIDYNFTASMENELDEIAGGEHAAVDFLTSFYFGESRG
GVGDAEIARSGGLKKMVTENLSEIDARSVNSIPLFTDDEGRQVVVRVGRYGPYLQRIPAG
GAAPAAGAPANGAAADGAPTAGAPVEADGEGGAPEDRVTIPEGLAPDELTPEKVAELFLG
GGGERKLGEHPDTGEPILLKSGRFGPYVSTGERNASLLRSQSPDSLSLADALRLLSLPRL
VGRDAEGNEILAANGRYGPYVKRGEDFRSLDSEDKLFTVTLDEALALLAAPKTRQRRAAA
PPLREMGPDPLTEKPLVIKDGRFGPYVTDGETNASLRRGQTPEALTIEEASEMLAEKRAK
GPAPRKKAAKKAAPKKAAATKSTAKKTAEKTTTATKATAAKTTAAKTTAAKKTATKTTAA
KKTTAAKKAAPKKATPAKSTARPAE
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
gtgccgagcagcgccaggagcaaccgtctggtcatcgtcgagtcaccggcgaaggccaag
acgatctcgggctatctcggcccgggctacgtcgtcgaggccagtttcgggcacgtccgt
gacctgccccgcaacgccgccgaggtgccgtcgggctacgaggacaagccgtgggcccga
ctcggcgtggacgtggacaacggcttcgcggcgctctacgtggtctcgccggaccggcgc
aagcagatcaccaagctgcgttcgctggtgaaggaggtcgacgaggtcttcctcgccacc
gatgaggaccgcgagggcgaggcgatcgcctggcacctggtggagacgctcaagcccaag
gtgccggtgcggcggatggtcttccacgagatcacccggccggccatccaggccgcggtg
gccaacccgcgggagatcgaccgcgacctggtggacgcgcaggaggcgcgccggatcctg
gaccggctgtacggctacgaggtgtcgccggtgctgtggcgcaaggtgcgcagcggcctg
tcggccggccgggtccagtcggtggccacccggatcgtggtcgagcgcgagcggcagcgg
atggctttccgcagcgccgagtactgggacatcctggcgaccctggccgtgcgggaggcc
ggcgagggtccgcgtaccttcggcgcgaccctggtggcgctgaacggcgaccgcatcgcc
accggcaaggacttcgagccgaccaccgggcgggtccgtcccggcgcgggcgtcacccac
ctcgacgaggcgggtgcgcgcggcctggcggcgcggctggacgggcggccgttcacggtc
acccgggtggaggagaagccgtaccggcgccggccgtacgcgccgttcatcacctcgacg
ctccagcaggaggcggcccgcaagctgcggttctcctcgcaacagacgatgcgcacggcg
cagcggctctacgagaacggctacatcacctacatgcggaccgactcggtcaacctgtcc
gagaccgccatcgcggcggctcgccggcagatcgccgagctgtacggggaccgcagcgtg
ccgccggagccgcgccggtacaccggcaaggtcaagaacgcccaggaggcgcacgaggcg
atccgcccggccggggacaacttccgcaccccgggtgacgtggccaaggagctgccggcc
gaggagtaccggctctacgagctgatctggcggcgcacgatcgcctcgcagatgaccgac
gcggtcggctccagcgtctcggtgcggatccgggcggtctccagcgcgagcgaggaggtc
gacttcgcggccaccggcaagacgatcaccgacccgggcttcctgcgcgcgtacgtcgag
tccagcgacgacgagaacgcggaggcggaggacgccgagcggcggttgccgaccctggtg
aaggaccagccgctgtccgctcaggaactggcggcgcagggccaccacacccaaccaccg
tcccggtacaccgaggcgtcgctggtgaaggcccttgaggagctgggcatcggccgcccg
tcgacgtacgcctcgatcatgcagacgatccaggaccgcggctacgtcagcaagcgcgga
caggcgttgatcccgtcgttcctggcgttcgccgtggtcgggctgctggagcggcactac
ccgcggctgatcgactacaacttcaccgccagcatggagaacgagctggacgagatcgcc
ggcggcgagcacgccgcggtcgacttcctgacctcgttctacttcggcgagtcccgcggc
ggggtcggtgacgccgagatcgcccggtccggcggtctgaagaagatggtcacggagaac
ctgagcgagatcgacgcgcgcagcgtgaactcgatcccgctgttcaccgacgacgagggt
cgacaggtggtggtgcgggtcggccggtacgggccgtacctgcagcgcatcccggccggc
ggtgcggcaccggctgccggcgcaccggcgaatggtgcagcggcggatggcgcaccgacg
gctggtgcaccggtcgaggccgacggggagggcggcgcgcccgaggaccgggtcacgatt
ccggaggggctggcgccggacgagctgaccccggagaaggtcgccgagttgttcctcggc
ggcggtggcgagcggaagctcggtgagcacccggacaccggggagccgatcctgctcaag
tccggccggttcggcccgtacgtctccaccggggagcgcaacgcctcgctgctgcgcagc
cagtcgccggattcgctgagcctggccgacgcgctgcggctgctctcgctgccccggctg
gtgggccgggacgccgagggcaacgagatcctggccgccaacggccggtacgggccgtac
gtgaagcgcggtgaggacttccgctcgctggacagcgaggacaagctgttcaccgtcacc
ctggacgaggctctcgcgctgctcgcggcgccgaagacccgccagcgccgggccgcggcc
ccgccgctgcgggagatgggccccgacccgctgaccgagaagccgctggtgatcaaggat
ggccggttcgggccgtacgtgaccgacggcgagaccaacgcctcgctgcgtcgcgggcag
acgccggaggcgctgaccatcgaggaagcctcggagatgctggcggagaagcgggccaag
ggtccggcgccccgcaagaaggcggccaagaaggcggcgccgaagaaggccgcggccacg
aagtcgaccgccaagaagacggcggagaagacgaccacggccaccaaggcgaccgcggcc
aagacgaccgcggccaagacgaccgcggcgaagaagaccgccaccaagaccaccgcggcg
aagaagaccaccgcggccaagaaggcggccccgaagaaggcgaccccggcgaagagcacg
gcccgcccggccgagtag
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