Plantactinospora sp. KBS50: CIK06_04450
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Entry
CIK06_04450 CDS
T05048
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
plk
Plantactinospora sp. KBS50
Pathway
plk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
plk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CIK06_04450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plk03400
]
CIK06_04450
Enzymes [BR:
plk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CIK06_04450
DNA repair and recombination proteins [BR:
plk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CIK06_04450
Prokaryotic type
CIK06_04450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Phenol_Hydrox
Motif
Other DBs
NCBI-ProteinID:
ASW53599
UniProt:
A0A248YJ37
LinkDB
All DBs
Position
951685..952398
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AA seq
237 aa
AA seq
DB search
MTDAAPASVPTLDLPALLPPAWREALAPHLEPADTAALGAFVAREYASRQVYPPVEDLFA
AYRLCQPQDCRVLLLGQDPYHRAGQAHGLSFSVRPGVRVPPSLRNVFRELAADLEVDPPV
GGDLTGWAEQGVLLLNSVLTVREGSPNSHAGHGWEAFTDATIRALDARAERIVFLLWGGY
ARRKRGLIVNPAHVVLEAGHPSPLNPRGFRGCRAFSATNKALADAGRPTIVWEHPAG
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgccgcacccgcatccgtacccaccctcgacctgcccgcgctgttgccgccc
gcctggcgggaggcgctggcgccccacctggagcccgccgacacggccgcgctcggcgcg
ttcgtcgcgcgggagtacgcgagccgccaggtctacccgccggtcgaggacctgttcgcc
gcctaccggctgtgccagccgcaggactgccgggtgctgctgctgggccaggacccgtac
caccgggccggccaggcgcacgggttgagcttcagcgtccggcccggcgtacgcgtcccg
ccctcgctgcgcaacgtcttccgggagctggccgcggacctggaggtggatccgccggtc
ggcggcgacctgaccggctgggcggaacagggcgtgctgctgctcaactcggtgctcacg
gtccgcgagggcagcccgaactcgcacgccggccacggctgggaggcgttcaccgacgcg
accatccgcgccctggacgcccgtgccgagcggatcgtcttcctgctctggggcgggtac
gcccggcgcaagcgggggctgatcgtgaaccccgcgcacgtggtgctggaggccggtcat
cccagcccgctcaacccgcgcggcttccgcggctgccgggcgttcagcgcgaccaacaag
gcgctggccgacgcgggccgcccgaccatcgtctgggagcacccggccggctga
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