Plantactinospora sp. KBS50: CIK06_04520
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Entry
CIK06_04520 CDS
T05048
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
plk
Plantactinospora sp. KBS50
Pathway
plk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CIK06_04520 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plk03019
]
CIK06_04520 (groL)
03110 Chaperones and folding catalysts [BR:
plk03110
]
CIK06_04520 (groL)
03029 Mitochondrial biogenesis [BR:
plk03029
]
CIK06_04520 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
plk04147
]
CIK06_04520 (groL)
Enzymes [BR:
plk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
CIK06_04520 (groL)
Messenger RNA biogenesis [BR:
plk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CIK06_04520 (groL)
Chaperones and folding catalysts [BR:
plk03110
]
Heat shock proteins
HSP60 / Chaperonin
CIK06_04520 (groL)
Mitochondrial biogenesis [BR:
plk03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
CIK06_04520 (groL)
Exosome [BR:
plk04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CIK06_04520 (groL)
Exosomal proteins of other body fluids (saliva and urine)
CIK06_04520 (groL)
Exosomal proteins of breast cancer cells
CIK06_04520 (groL)
Exosomal proteins of colorectal cancer cells
CIK06_04520 (groL)
Exosomal proteins of bladder cancer cells
CIK06_04520 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
UreE_C
DUF4371
Motif
Other DBs
NCBI-ProteinID:
ASW53611
LinkDB
All DBs
Position
964041..965687
Genome browser
AA seq
548 aa
AA seq
DB search
MAKILSFSDDARHLLEHGVNALADTVKVTLGPRGRNVVLDKKFGAPTITNDGVTIAKEIE
LTNPYENLGAQLVKEVATKTNDVAGDGTTTATVLAQAMVREGLRNVAAGANPTGLKRGID
AAANKVSDALLGKAVEVGGKESVAHVATISAQDATIGEMIAEAMEKVGRDGVITVEEGST
LATELEVTEGLQFDKGFISPNFVTDSESQEAVLDDPYILITTQKISAIEELLPLLEKILS
DSKPLLIVAEDVEGQALATLVVNSIRKTLKVCAVKAPGFGDRRKAMLQDMAVLTGAELVA
PELGYKLDQVGLEVLGGARRVVVDKENTTVIDGKGRDTEVADRIGQIRKEIEASDSDWDR
EKLSERLAKLSGGIAVIKAGAATEVEMKERKHRIEDAISATKAAVEEGTVPGGGAALVQI
AALLEDGLGLTGDEKVGVSIVRKSLLEPLRWIAQNAGQDGYVVVQKVIGADWGTGLNAAT
GEYVDLAAAGILDPVKVTRNAVLNAASIAGLLLTTESLVVEKPAEPEPAAAGGHGHSHGH
GHQHGPGF
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcctgagcttctcggacgacgcccggcacctgctggagcacggtgtcaac
gccctcgcggacacggtcaaggtcaccctcggcccgcgcgggcgcaacgtcgtcctggac
aagaaattcggtgcgcccacgatcaccaacgacggcgtgaccatcgccaaggagatcgag
ctcaccaacccgtacgagaacctcggcgcgcagctggtcaaggaggtggcgaccaagacc
aacgacgtcgccggcgacgggaccaccaccgccaccgtgctggcccaggcgatggtccgg
gagggcctgcgcaacgtggccgcgggcgccaacccgaccggcctcaagcgcggcatcgac
gcggcggccaacaaggtctccgacgccctgctcggcaaggccgtcgaggtgggcggcaag
gagtccgtcgcgcacgtggcgacgatctccgcgcaggacgccaccatcggcgagatgatc
gccgaggcgatggagaaggtcggccgcgacggcgtcatcaccgtcgaggagggctccacg
ctcgccaccgagctggaggtcaccgagggtctccagttcgacaagggcttcatctccccg
aacttcgtcaccgactcggagtcgcaggaggcggtgctcgacgacccgtacatcctgatc
acgacccagaagatctcggcgatcgaggaactgctgccgctgctggagaagatcctctcc
gacagcaagccgctgctgatcgtggccgaggacgtcgagggacaggcgctggccaccctg
gtggtcaactcgatccgcaagaccctgaaggtctgcgcggtgaaggcgcccggcttcggc
gaccggcgcaaggcgatgctgcaggacatggcggtcctgaccggcgccgagctggtcgcc
ccggagctgggctacaagctcgaccaggtgggcctggaggtgctcggcggcgcccggcgg
gtggtggtggacaaggagaacaccaccgtcatcgacggcaagggccgggacaccgaggtc
gccgaccggatcggccagatccgcaaggagatcgaggcctccgactccgactgggaccgg
gagaagctgtccgagcgactggccaagctctccggcggcatcgcggtgatcaaggccggc
gccgccaccgaggtcgagatgaaggagcgcaagcaccgcatcgaggacgccatctcggcg
accaaggccgcggtcgaggagggcacggtgcccggcggtggcgccgcgctcgtgcagatc
gccgccctgctggaggacggcctggggctgaccggtgacgagaaggtgggcgtcagcatc
gtccgcaagtcgctgctcgaaccgctgcggtggatcgcgcagaacgccggccaggacggg
tacgtcgtggtgcagaaggtcatcggtgccgactggggcaccggcctgaacgccgcgacc
ggcgagtacgtcgacctggccgccgccggcatcctcgacccggtcaaggtcacccgcaac
gcggtgctgaacgccgcctccatcgccggcctgctgctcaccacggagagcctggtcgtg
gagaagccggccgagccggagccggccgcggccggtgggcacggccactcgcacggccac
ggccaccagcacggcccgggcttctga
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