Plantactinospora sp. KBS50: CIK06_05000
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Entry
CIK06_05000 CDS
T05048
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
plk
Plantactinospora sp. KBS50
Brite
KEGG Orthology (KO) [BR:
plk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plk03016
]
CIK06_05000
Enzymes [BR:
plk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
CIK06_05000
Transfer RNA biogenesis [BR:
plk03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
CIK06_05000
Prokaryotic type
CIK06_05000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_4
AIMA-like_N
Lactamase_B_3
Motif
Other DBs
NCBI-ProteinID:
ASW53686
UniProt:
A0A248YJ28
LinkDB
All DBs
Position
complement(1072477..1073403)
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AA seq
308 aa
AA seq
DB search
MSRELVVLGTASQVPTRHRNHNGYLLRWDGEGILFDPGEGTQRQMLLAGVSATDVTRICV
THFHGDHCLGLPGVIQRLSLDRVPHPVAAHFPASGADYFAALRHASSFYETADLRPEPVD
GDVQVIGTPVGRLEARRLRHPVEAYGYRLVEPDTRRLLPDRLAAYGLAGPAVGELKAAGH
LDLGGRRVTLAEVSVSRPGQVFAFVMDTGLCDNVYALAEGADLLVIESTFRTADAKLAND
YGHLTAAQAARVAAESGVRRLVLTHFSQRYPDVRGFLDEARAEFPGDVSVAEDLSRFPLP
SRRVRSAG
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgcgagctggtggtgctcggcacggcgagccaggtaccgacccggcatcgcaac
cacaacggttacctgctgcgctgggacggcgaggggatcctgttcgatcccggtgagggc
acccagcggcagatgctgctggccggcgtctcggccaccgacgtcacccggatctgcgtc
acccattttcatggcgatcattgtctcggcctgcccggggtgatccagcggctctccctg
gaccgcgtaccgcacccggtggccgcacactttcccgcctcgggtgccgactacttcgcg
gcgcttcggcacgccagttccttctacgagaccgccgatctgcgtcccgagccggtcgac
ggggacgtacaggtgatcggaaccccggtgggccggttggaggcccgccggctgcggcac
ccggtcgaggcgtacggctaccgcctggtcgagccggacacccggcggctgctgccggac
cggctggcggcgtacggcctcgccgggccggccgtcggtgagttgaaggccgccggccac
ctggacctcggcgggcgccgggtgaccctggccgaggtgagcgtgtcccggccgggccag
gtgttcgcgttcgtgatggacaccgggctctgcgacaacgtgtacgcgctggccgagggc
gccgacctgctcgtcatcgagtcgaccttccggaccgcggacgcgaagctggcgaacgac
tacggccaccttacggccgcgcaggccgcccgggtggcggccgagtccggggtacgccgg
ctggtgctcacccatttttcgcagcgttacccggatgtccgtggcttcctcgacgaggcg
cgggcggagtttcccggcgacgtgtcggtggcggaggacctgtcgcggtttccgcttccg
agccgacgggtacgctcagccggatga
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