Plantactinospora sp. KBS50: CIK06_07560
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Entry
CIK06_07560 CDS
T05048
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
plk
Plantactinospora sp. KBS50
Brite
KEGG Orthology (KO) [BR:
plk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plk03016
]
CIK06_07560
Enzymes [BR:
plk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CIK06_07560
Transfer RNA biogenesis [BR:
plk03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CIK06_07560
Prokaryotic type
CIK06_07560
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ASW54073
UniProt:
A0A248YK56
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All DBs
Position
1657342..1658235
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AA seq
297 aa
AA seq
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MDADGLIVVDKPAGMTSHDVVARVRRLARTRRVGHGGTLDPMATGVLVLGVGRATRLLTY
VIGADKSYTATVRLGQATVTDDAEGEMTAETPAGHLTDAAVRAAFAELTGEIDQVPSAVS
AIKIDGQRAYKRVREGESVELAARRVRIARLTVLAIRRDAGPVVEVDIEVDCSSGTYIRA
IARDAGAALGVGGHLSALRRTAVGGFTLAEAATLADLAERAERTGAVVALAPAEAARRFL
PVRQAEPAEERVLGHGGPLTPAGIPGPYAVLGADGRLIAIVSERDGKARPEIVLAPA
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
gtggacgccgatggactgatcgtggtggacaagccggccgggatgacctcgcacgacgtg
gtggcccgggtgcgccggctggcccgtacccgccgggtggggcacggcgggacgctggac
ccgatggccaccggcgtgctggtgctcggcgtcggccgggccacccggctgctcacctac
gtgatcggcgccgacaagagctacacggccaccgtgcggctggggcaggccaccgtgacc
gacgacgccgagggggagatgacggccgagaccccggccgggcacctcaccgacgcggcg
gtccgggccgccttcgccgagctgaccggcgagatcgaccaggtgccgagcgcggtcagc
gccatcaagatcgacggtcagcgggcgtacaagcgggtccgcgagggtgagtcggtcgag
ctggccgcgcggcgggtccggatcgcccggttgaccgtgctggcgatccgccgcgacgcc
ggcccggtggtcgaggtggacatcgaggtggactgctcgtcggggacgtacatccgggcc
atcgcccgggacgcgggcgcggcgctcggggtcggcggccacctgagcgcgctgcgccgc
accgcggtcggcgggttcaccctggccgaggcggcgaccctggcggacctggccgaacgc
gccgagcggaccggcgcggtggtggcgctggcgccggccgaggcggcccgccggttcctg
ccggtccgccaggccgagccggccgaggagcgggtgctcgggcacggcggtccgctcacg
ccggccggcatccccggaccgtacgcggtgctcggcgcggacggccggctgatcgctatc
gtcagcgagcgggacggcaaggcccggccggagatcgtgctggcgcccgcctga
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