Plantactinospora sp. KBS50: CIK06_08310
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Entry
CIK06_08310 CDS
T05048
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
plk
Plantactinospora sp. KBS50
Brite
KEGG Orthology (KO) [BR:
plk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plk03016
]
CIK06_08310
Enzymes [BR:
plk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CIK06_08310
Transfer RNA biogenesis [BR:
plk03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CIK06_08310
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
ASW54198
UniProt:
A0A248YKK7
LinkDB
All DBs
Position
complement(1837976..1839292)
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AA seq
438 aa
AA seq
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MTDEPPLRRRAAHRRAGDEPYPTPAPEPEATVSPDPAAPGPVPLLTPHEGVPEPIETADA
LAEVVARFAAGTGPVAIDAERASGYRYSQRAYLVQLRRAGAGTVLIDPLPLADLATLDAA
IGPAEWVLHAASQDLPCLAEIGLRPRRLFDTELAARLAGFERVGLAALTEQLLGYTLQKH
HSAADWSTRPLPESWLNYAALDVEMLTELRDALDAELERQGKEKWAAEEFAALVASASRP
PRPRVDPWRRTSGIHRVRGARAQARVRSLWYARDTIAARRDSAPGRVLPDAAIIAAAELD
PRDERTLLTLPGFGGRSVRRLARTWLEALAEARQLADDALPVSPVVEGPPPPHRWAERDP
VAAARLARCRAVVTRIATEHNLPPENLISPDSVRRLAWTPPAEIRTDSVAETLRGFGARE
WQLGLIADELAAALPAAD
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacgaaccacccctgcgccgtcgggccgcgcaccgccgagcaggggacgagccg
taccccacgccggcgcccgagccggaagccacggtgagccccgacccggcggccccgggg
cccgtgcccttgctcaccccgcacgagggcgtacccgagccgatcgagacggcggacgca
ctcgccgaggtcgtcgcccggttcgccgccggcaccggcccggtggccatcgacgccgag
cgcgcctccggctaccggtacagccagcgtgcctatctggtccagctccgccgcgccggc
gccggcaccgtgctgatcgacccgctgccgctggccgacctggccaccctcgacgccgcg
atcggaccggccgagtgggtgctgcacgcggccagccaggatctgccctgcctggccgag
atcgggctgcggccgcgccggctgttcgacaccgagctggccgcgcggctggccggcttc
gaacgggtcggcctggccgcgctcaccgaacaactgctgggctacacgctgcagaagcac
cactcggcggcggactggtccacccggccgctgccggagtcctggctcaactacgccgcg
ctcgacgtggagatgctcaccgaactgcgcgacgcgctcgacgcggagctggagcggcag
ggcaaggagaagtgggcggccgaggagttcgcggcgctcgtcgcgtccgcctcccgaccg
ccccggccgcgggtcgacccgtggcggcgtacctccggcatccaccgggtccgcggggcg
cgggcgcaggcccgggtgcgctccctgtggtacgcccgggacaccatcgcggcccggcgg
gattcggcaccgggccgggtgctgccggacgcggcgatcatcgccgccgccgagctggac
ccgcgggacgagcggaccctgctgacgctgcccggtttcggcggccggtcggtccgccgg
ctggcccggacctggctggaggcgctggccgaggcgcgccagctcgccgacgacgcgctg
ccggtgagcccggtggtggagggtccgccgccgccgcaccggtgggccgagcgcgatccg
gtggcggcggcccggctggcccgctgccgggccgtggtgacccggatcgccaccgagcac
aacctgccgccggagaacctgatcagccccgactcggtccgccggctcgcctggacgcca
ccggcggagatccgcaccgactcggtcgccgagacgctgcgcgggttcggcgcccgggag
tggcagctcgggctgatcgccgacgagttggccgccgcgctgccggcggccgactga
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