Plantactinospora sp. KBS50: CIK06_09425
Help
Entry
CIK06_09425 CDS
T05048
Name
(GenBank) AAA family ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
plk
Plantactinospora sp. KBS50
Pathway
plk04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
plk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
CIK06_09425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plk03019
]
CIK06_09425
03009 Ribosome biogenesis [BR:
plk03009
]
CIK06_09425
04131 Membrane trafficking [BR:
plk04131
]
CIK06_09425
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
plk04147
]
CIK06_09425
Messenger RNA biogenesis [BR:
plk03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
CIK06_09425
Ribosome biogenesis [BR:
plk03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
CIK06_09425
Membrane trafficking [BR:
plk04131
]
SNARE
SNARE associated proteins
Others
CIK06_09425
Autophagy
Aggrephagy
Other aggrephagy associated proteins
CIK06_09425
Exosome [BR:
plk04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CIK06_09425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_16
AAA_lid_3
RuvB_N
AAA_22
AAA_5
AAA_33
RNA_helicase
AAA_28
Mg_chelatase
nSTAND3
AAA_18
TIP49
IstB_IS21
AAA_3
Parvo_NS1
NPHP3_N
AAA_25
AAA_24
TsaE
NACHT
DUF881
Zeta_toxin
TY-Chap1
DUF815
ORC-CDC6-like
Bac_DnaA
bpMoxR
TniB
AAA_14
AAA_7
ABC_tran
AAA_11
Rad17
Motif
Other DBs
NCBI-ProteinID:
ASW54363
UniProt:
A0A248YL01
LinkDB
All DBs
Position
complement(2118721..2120295)
Genome browser
AA seq
524 aa
AA seq
DB search
MPEQPSPLRPEADHFTRFGADVTIVDPTGLLAAVRTGPVEVFDGTDFPAPVRRVRLALRR
DVEDDHPVHRFMAEIRTGAPGGALDNPAAWLLVGVGPVGLLLARRLAAVEPTAGRVLAQA
GRVVAEAGRRLGLPPPPTGAADPTDPAARTDPAGRTDDPAGAAVLAEAADLGLTPVVRRR
ASGEGTVVTVRADRPGDALTPAHLRVAFALVLQVVRELAADGADPVVLRGRRYVLDAGSE
PGPAYQGGPAAGSPRRADQVTLDQVGGLDEVVAQFREIAVSFRHPEVMARWGARRPQGIL
LYGPPGTGKTMLARALANEIGAVFREIRTPEILDKWLGGSERNIKQIFRDARRWREPTVM
LFDEFDSIISYAGAGGDAASQAVNAVAGIFKQEMNTLIEENPNVIVMATTNFPHRVDASL
IRSGRFDVKLAIPLPDETGRAQIITKMIRDLMQRHEAPPFRMFGDDVDPADLATRTAGMT
GADLREILRRVQLAKAMREAVDGVPADPISQRDLIEHTAALHRA
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgccggaacaacccagccccctgcggccggaggccgaccacttcacccggttcggcgcc
gacgtgacgatcgtcgacccgaccgggctgctggccgcggttcgcaccggcccggtcgag
gtcttcgacggcaccgacttcccggcaccggtccggcgggtccggctcgcgctgcgtcgg
gacgtcgaggacgaccaccccgtacaccggttcatggccgagatccgcaccggcgcaccg
ggcggcgccctcgacaacccggcggcctggcttttggtcggcgtcgggccggtcggcctg
ctgctcgcccgccggctggccgccgtggaaccgacggccggacgggtcctcgcccaggcc
ggccgcgtggtggccgaggcgggccgccggctgggacttccgccgccgccgaccggcgcc
gccgacccgaccgaccccgcggcgcgtaccgatccggcgggccgcaccgacgacccggcc
ggggccgcggtgctggccgaggccgccgacctcggactcaccccggtcgtccggcgccgc
gcgtcgggcgagggaacggtcgtcacggtgcgcgccgaccggcccggcgacgcgctcacc
ccggcacacctgcgggtggccttcgcgctggtgttgcaggtggtccgggagttggccgcg
gacggcgccgaccccgtcgtcctgcgcggacgccggtacgtgctggacgccgggtccgag
cccggcccggcgtaccagggcggcccggcggccggctcaccgcgccgggccgaccaggtc
accctggaccaggtcggcggcctcgacgaggtggtcgcgcagttccgggagatcgcggtg
tcgttccggcaccccgaggtgatggcccggtggggcgcccgccgcccgcagggcatcctg
ctgtacggcccgcccggcaccggaaagaccatgctggcccgggcgctggccaacgagatc
ggcgcggtcttccgggagatccgcaccccggagatcctggacaagtggctcggcggctcc
gagcgcaacatcaagcagatcttccgggacgcccgccgctggcgggaacccacggtcatg
ctcttcgacgagttcgacagcatcatcagctacgccggtgccggcggcgacgcggccagc
caggcggtgaacgcggtggccgggatcttcaagcaggagatgaacacgctgatcgaggag
aacccgaacgtcatcgtgatggccaccaccaacttcccgcaccgggtggacgcctcgctg
atccggtccggccgcttcgacgtgaagctggccatcccactgcccgacgagaccggccgg
gcgcagatcatcacgaagatgatccgggacctcatgcagcggcacgaggcgccaccgttc
cggatgttcggcgacgatgtggacccggcggatctggcgacgcggaccgccgggatgacc
ggagcggacctgcgggagatcctgcgccgggtgcagttggccaaggcgatgcgcgaggcc
gtggacggcgttccggccgacccgatcagccagcgggacctgatcgagcacaccgccgcg
ctgcaccgggcctga
DBGET
integrated database retrieval system
