Plantactinospora sp. KBS50: CIK06_10440
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Entry
CIK06_10440 CDS
T05048
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
plk
Plantactinospora sp. KBS50
Pathway
plk00020
Citrate cycle (TCA cycle)
plk00190
Oxidative phosphorylation
plk00650
Butanoate metabolism
plk00720
Other carbon fixation pathways
plk01100
Metabolic pathways
plk01110
Biosynthesis of secondary metabolites
plk01120
Microbial metabolism in diverse environments
plk01200
Carbon metabolism
Module
plk_M00009
Citrate cycle (TCA cycle, Krebs cycle)
plk_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
plk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
CIK06_10440 (sdhA)
00650 Butanoate metabolism
CIK06_10440 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
CIK06_10440 (sdhA)
00720 Other carbon fixation pathways
CIK06_10440 (sdhA)
Enzymes [BR:
plk01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
CIK06_10440 (sdhA)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Pyr_redox_2
GIDA
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
ASW54516
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Position
complement(2364483..2366417)
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AA seq
644 aa
AA seq
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MLYTEGDPIADAKAPDGPIADRWSRRRFEAKLVNPANRRKRHVIMVGTGLAGGSAAATLG
EMGYQVTSFCYQDSPRRAHSIAAQGGINAAKNYRNDGDSIHRLFYDTVKGGDFRSRESNV
HRLAEVSVEIIDQCVAQGVPFAREYGGLLDTRSFGGAQVQRTFYARGQTGQQLLLGAYQA
LERQIGLGHVTMHSRHEMLELIVVDGRARGIVARDLVTGEIGTHLADAVVLASGGYGNVF
YLSTNAKGCNVTATWRAHRKGAYFANPCYTQIHPTCIPVSGDHQSKLTLMSESLRNDGRV
WVPQTAGDDRSPRDIPEDERDYYLERMYPSFGNLVPRDIASRAAKNVCDSGRGVGPSGLG
VYLDFADAISRLGRRTVQERYGNLFEMYQRITGEDPYEVPMRIYPAVHYTMGGLWVDYDL
QSTIPGLFVVGEANFSDHGANRLGASALMQGLADGYFVLPSTLGDYLAGGQFEPVDENHP
EAVRARADVADRIARLLAVDGDRTVDSFHRELGQIMWEHCGMERTDAGLRKALGEVRALR
EQFWHRVRVPGDGEGLNQALERAGRVADLFELAELMCVDALHRTESCGGHFRAESQTPDG
EAQRDDEHFSYVAAWEFTGADQPPVLHREDLTFEYVHPSQRSYK
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgctgtacaccgagggcgacccgatcgccgacgccaaggccccggacggcccgatcgcc
gaccggtggagccggcgccggttcgaggccaagctggtcaaccccgccaaccggcgcaag
cggcacgtgatcatggtgggtaccggcctggccggcggctcggccgccgccaccctgggc
gagatgggctaccaggtcacgtcgttctgctaccaggacagtccccggcgggcgcactcc
atcgccgcccagggcgggatcaacgccgccaagaactaccgcaacgacggcgactcgatc
caccggctgttctacgacacggtcaagggcggcgacttccggtcccgggagtccaacgtg
caccggctggccgaggtctccgtggagatcatcgatcagtgcgtggcccagggcgtgccg
ttcgcccgcgagtacggcgggttgctggacacccggtccttcggcggcgcgcaggtgcag
cgcaccttctacgcccgcggccagaccggccagcaactgctgctcggcgcgtaccaggcc
ctggaacggcagatcggcctgggccacgtgaccatgcacagccggcacgagatgctggag
ctgatcgtggtggacggccgggctcgcggcatcgtggcgcgggacctggtgaccggcgag
atcgggacgcacctcgccgacgcggtggtgctggcctccggcgggtacggcaacgtgttc
tacctgtccacgaacgcgaagggctgcaacgtcaccgccacctggcgggcgcaccgcaag
ggggcgtacttcgccaacccctgctacacccagatccatccgacctgcatcccggtctcc
ggcgaccaccagtccaagctcaccctgatgagcgagtcgctgcgcaacgacggccgggtc
tgggtgccgcagaccgccggcgacgaccggtccccccgggacatccccgaggacgagcgg
gactactacctggagcggatgtacccgtcgttcggcaacctggtgccccgggacatcgcc
tcccgggcggccaagaacgtctgcgactccggccgcggggtcggacccagcggcctgggc
gtctacctcgacttcgccgacgcgatctcccggctcggtcggcggaccgtgcaggagcgg
tacggcaacctgttcgagatgtaccagcggatcaccggcgaggacccgtacgaggtgccg
atgcggatctatccggcggtgcactacacgatgggcgggctgtgggtggactacgacctc
cagtcgaccatcccggggctgttcgtggtcggcgaggcgaacttctccgaccacggcgcc
aaccggctcggcgcctcggcgctgatgcagggcctggccgacgggtacttcgtgctgccc
agcacgctcggcgactacctggccggcgggcagttcgagccggtcgacgagaaccacccg
gaggcggtccgggcgcgggccgacgtggcggaccggatcgcccggctgctggcggtcgac
ggcgaccggacggtcgactcgttccaccgcgaactcgggcagatcatgtgggagcactgc
gggatggagcggaccgacgccgggctgcgcaaggcgctcggcgaggtccgcgcgctgcgc
gagcagttctggcaccgggtccgggtgcccggcgacggcgaggggctcaaccaggccctc
gaacgggccggtcgggtggccgacctgttcgaactggccgagctgatgtgcgtcgacgcg
ctgcaccggaccgagtcctgcggcggccacttccgggccgagagccagaccccggacggc
gaggcccagcgcgacgacgagcacttcagctacgtcgcggcctgggagttcaccggcgcc
gaccagcctcccgtgctgcaccgggaggacctgacgttcgagtacgtccaccccagccag
cggagctacaagtga
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