Plantactinospora sp. KBS50: CIK06_10715
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Entry
CIK06_10715 CDS
T05048
Name
(GenBank) B/F/G family RNA polymerase sigma-70 factor
KO
K03090
RNA polymerase sigma-B factor
Organism
plk
Plantactinospora sp. KBS50
Brite
KEGG Orthology (KO) [BR:
plk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plk03021
]
CIK06_10715
Transcription machinery [BR:
plk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CIK06_10715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
MarR
HTH_3
HTH_23
DUF7343
HTH_10
DUF134
MarR_2
Sigma70_ECF
GerE
NirdL-like_HTH
HTH_24
HTH_31
HTH_37
Phage_antitermQ
Motif
Other DBs
NCBI-ProteinID:
ASW57594
UniProt:
A0A248YV55
LinkDB
All DBs
Position
complement(2420699..2421499)
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AA seq
266 aa
AA seq
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MTQQSTAPATAPTATQPGDSATELLQAMAALPAGHPSRAALRARAIEAWLPLAQHLAHRY
SGRGEPSDDLVQTASVGLIKAVDKFDPSRGVDFAGYAIPTIIGELKRHFRDRTWDIRVPR
RLQELRLAISEANSTLLQSLGRSPTVADIAAHLKVTEEEVLEGLEGARAYNAVSLSTPTG
DGERATELGDMLGGEDGEFELAELRVALGPALATLDEREQKILTLRFYGNLTQSQIAEQI
GVSQMHVSRLLARALTKLRGQLVDTY
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgacccagcagtccaccgcccccgcgaccgcaccgaccgcgacccagccgggcgacagc
gccaccgagctgctgcaggcgatggccgcgctgccggccgggcacccgtcccgcgccgcg
ctgcgggccagggccatcgaggcgtggctgccgctggcccagcacctcgcccaccgctac
agcggccggggcgagcccagcgacgacctggtgcagaccgcgtccgtcggcctgatcaag
gccgtggacaagttcgaccccagccgcggcgtcgacttcgccggctacgccatcccgacc
atcatcggcgaactcaagcggcacttccgggaccgcacctgggacatccgggtcccccgc
cggctccaggagctgcgactggccatctccgaggcgaacagcacgctgctgcagtcgctc
ggccggtcgccgacggtcgccgacatcgccgcccacctgaaggtcaccgaggaagaggtg
ctggagggtctggagggcgcacgggcgtacaacgccgtgtcgctgtccaccccgaccggc
gacggcgagcgggcgaccgaactcggcgacatgctcggcggcgaggacggcgagttcgag
ctggccgagctgcgggtggccctcggcccggcgctcgccaccctcgacgagcgcgagcag
aagatcctcacgctgcggttctacggcaacctgacccagtcgcagatcgccgagcagatc
ggcgtctcgcagatgcacgtctcccggctgctcgcccgcgccctgaccaagctgcgcggc
cagctcgtcgacacctactga
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