Plantactinospora sp. KBS50: CIK06_13695
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Entry
CIK06_13695 CDS
T05048
Name
(GenBank) RNA polymerase subunit sigma-70
KO
K03090
RNA polymerase sigma-B factor
Organism
plk
Plantactinospora sp. KBS50
Brite
KEGG Orthology (KO) [BR:
plk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plk03021
]
CIK06_13695
Transcription machinery [BR:
plk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CIK06_13695
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
STAS_2
Sigma70_r4_2
STAS
HTH_23
Sigma70_ECF
MarR_2
HTH_Tnp_4
IF2_N
MarR
HTH_Crp_2
DUF7343
HTH_24
HTH_28
HTH_3
HTH_10
Motif
Other DBs
NCBI-ProteinID:
ASW55012
UniProt:
A0A248YN89
LinkDB
All DBs
Position
3080024..3081157
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AA seq
377 aa
AA seq
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MFGQTTTPAPTERGLEDLDAAALAYAARIEGLPPERRQEARDDLVRFALPFAGRLARRYR
GRGEPLEDLEQVARLGLVNAVDRYDPERGSFTAYAAITIVGEIKRHFRDRTWGVHVPRRL
RDLILEVGQATSALTSELSRAPTVAELAERLETPQEEILAALESAAGYSPASLNAPVGGE
SSAEFGDLVGESDNQLESVDDRVTVSGLLGHLPWRERRILAMRFYGNQTQAEIAARFGIS
QMHVSRLLSRALTWLRQSMLNDAPAPWQNGTAEPEAPRSRMAVRRTGDGVLVEVTGDVDQ
DGAERLRRVLGEAVGTGHPAEVVVDLAGVGALHAAAATALVAARDVALRSGIPVRLARAR
PAVRAVLATAGLAAVPG
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgttcggacagaccaccacaccggcaccgacggaacgcgggctggaggacctggacgcg
gcggcgctcgcgtacgcggcgcggatcgaggggctgccgcccgagcgccggcaggaggcg
cgcgacgacctggtccggttcgcgttgccgttcgccggccggctggcccggcggtaccgg
gggcggggcgaaccgcttgaggacctggagcaggtcgcccggctgggtctggtcaacgcc
gtcgaccggtacgaccccgagcgggggtcgttcaccgcgtacgcggcgatcacgatcgtc
ggtgagatcaagcggcacttccgcgaccggacctggggggtgcacgtgccccgccggctg
cgggacctgatcctggaggtcggtcaggccacgtccgcgctgaccagcgagctgagccgg
gcgcccaccgtggccgaactggccgagcggctggagacgccgcaggaggagatcctcgcg
gcgctggaatcggcggccggctacagcccggcctcgctcaacgccccggtcggcggggag
agttccgccgagttcggcgacctggtcggcgagtcggacaaccaactcgaatcggtcgac
gaccgggtcaccgtgtccggtctgctcggccacctgccctggcgggagcggcgcatcctg
gccatgcgcttctacggcaaccagacccaggcggagatcgcggcccggttcggcatctcc
cagatgcacgtctcccggctgctgtcccgggcgctcacctggctgcgccagtcgatgctc
aacgacgcgccggcaccctggcagaacgggacggccgagccggaggcgccgcggtcgcgg
atggccgtgcgccggaccggggacggggtgctggtcgaggtgaccggcgacgtcgaccag
gacggcgcggaacgcctgcgccgggtgctcggcgaggccgtcggcaccggccacccggcc
gaggtcgtggtcgatttggccggcgtcggagcgctgcacgccgccgccgcgaccgcgctg
gtcgccgcccgggacgtggcgctgcgatccggcatcccggtccggctggcccgggccaga
cccgcggtacgggccgtgctcgccaccgccggcctggccgccgtgcccggttga
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