Plantactinospora sp. KBS50: CIK06_15410
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Entry
CIK06_15410 CDS
T05048
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
plk
Plantactinospora sp. KBS50
Pathway
plk00040
Pentose and glucuronate interconversions
plk01100
Metabolic pathways
plk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
plk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CIK06_15410
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CIK06_15410
Enzymes [BR:
plk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
CIK06_15410
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Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
ASW55264
UniProt:
A0A248YNH8
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Position
3458291..3459673
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AA seq
460 aa
AA seq
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MRYRRSAARTLAAVLALTAPAALAPTPASAVTPTRAGTAERQLGPAANALGRQVLPDNDG
WAAIDSGTTGGSTAGADQVYVVSSRAELVDALGGDNATNRSNATPKIIFIDGRVDGFEAD
DGHLLDCADLADPDYTLDAYLATYDPAVWGRTNPTGPLEEARVRSVANQTRQTQINVGPN
TTIIGRHGASLTGLTLMIDSANNVIVRNLTFVDARDCFPAWSPTDGDTGNWNSQYDNLSV
RRSEHVWVDHSSFSDGDNPDSGQPLYFGRPYQVHDGSLDITHTASLVTVTYNRFTGRDKL
MLIGSSNTVGPDVDRLKVTVHGNYFDGDLQRLPRVRFGQVDVYNNYYRLGGPDFVYALGV
GVQSSLYAENNYFDLNDGTTAADLLYDWGGTAITVRGNWVREGGALPHPVDLLAAYNATH
DPDLAGDVGWTPVLRAGPVLPAPLVPFAVRLLAGANRLPV
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgcgataccgcagatcggccgcgaggacgctcgcggccgtcctcgcgttgaccgccccg
gccgccctggccccgacccccgcgagcgccgtcaccccgacgcgcgcgggcaccgccgag
cggcagctcggcccggcggcgaacgccctgggccgccaggtgctgccggacaacgacggc
tgggccgccatcgacagcggcaccaccggcggctccaccgccggcgccgaccaggtgtac
gtggtgtccagccgcgccgagttggtcgacgcgctgggcggagacaacgccaccaaccgg
agcaacgccacgccgaagatcatcttcatcgacggccgggtggacgggttcgaggccgac
gacggacacctgctggactgcgccgacctggccgaccccgactacacgctggacgcctac
ctggccacctacgacccggcggtgtgggggcggaccaaccccaccggcccgctggaggag
gcccgggtgcgctcggtggccaaccagacccggcagacccagatcaacgtcgggcccaac
accacgatcatcggccggcacggcgccagcctgaccgggctgaccctgatgatcgacagc
gcgaacaacgtgatcgtgcgcaacctcaccttcgtggacgcccgcgactgcttcccggcc
tggtcgcccaccgacggcgacaccggcaactggaactcgcagtacgacaacctctcggtc
cggcgcagcgaacacgtctgggtggaccacagctccttcagcgacggcgacaacccggac
agcggccagccgctctacttcggccggccctaccaggtgcacgacggctcgctggacatc
acccacaccgccagcctggtcaccgtcacgtacaaccggttcaccgggcgggacaagctg
atgctgatcggctcgtcgaacaccgtcggcccggacgtcgaccggctcaaggtgaccgtg
cacggcaactacttcgacggcgacctgcaacggctgccccgggtccggttcggccaggtc
gacgtctacaacaactactaccggctcggcgggccggacttcgtctacgccctcggcgtc
ggcgtgcagtcgtccctctacgccgagaacaactacttcgacctcaacgacgggaccacg
gccgccgacctgctctacgactggggcggcaccgcgatcacggtgcgcggcaactgggtc
cgcgagggcggcgcgctgccccaccccgtcgacctgctcgccgcgtacaacgccacgcac
gacccggacctggccggcgacgtcggctggacccccgtgctgcgcgccggcccggtactg
ccggccccgctggtgccgttcgcggtacgactgctcgccggggccaaccggctgccggtc
tga
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